miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 109 bits (55), Expect = 4e-24
Identities = 62/63 (98%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgagttgttcccgaacatatcacagtgattttccttt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgagttgttccc-aacatatcacagtgattttccttt 61
Query: 61 ata 63
|||
Sbjct: 62 ata 64
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 56.0 bits (28), Expect = 5e-08
Identities = 57/66 (86%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgagttgtt---cccgaacatatcacagtgattttcc 57
||||||||||||||||||||||||| ||| | || ||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttcc 62
Query: 58 tttata 63
||||||
Sbjct: 63 tttata 68
