miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36197_der-mir-277:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36417_dme-mir-277:mirbase
Length = 100
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36418_dme-mir-277:mirbase
Length = 100
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>37157_dse-mir-277:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>37526_dya-mir-277:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36119_dan-mir-277:mirbase
Length = 98
Score = 139 bits (70), Expect = 4e-34
Identities = 91/98 (92%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>37450_dwi-mir-277:mirbase
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 92/99 (92%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatc-caaagcatgt 59
|||||||||||||||||||||||||||||||||||||||||||| | || ||||| |||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaaatttctaaaagcttgt 60
Query: 60 aaatgcattatttggtacgacattccagaacgtacaatc 98
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aaatgcactatctggtacgacattccagaacgtacaatc 99
>36871_dpe-mir-277:mirbase
Length = 98
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
|||||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 1 ttgaaggttttgggttgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36951_dps-mir-277:mirbase
Length = 100
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
|||||||||||||| |||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 1 ttgaaggttttgggttgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36794_dmo-mir-277:mirbase
Length = 88
Score = 115 bits (58), Expect = 6e-27
Identities = 79/86 (91%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgtaaatgca 66
||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgtaaatgca 62
Query: 67 ttatttggtacgacattccagaacgt 92
||| |||||||||||||||||||||
Sbjct: 63 ctatctggtacgacattccagaacgt 88
>36286_dgr-mir-277:mirbase
Length = 89
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatc-caaagcatgtaaatgc 65
||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaaagcttgtaaatgc 62
Query: 66 attatttggtacgacattccagaacgt 92
| ||| |||||||||||||||||||||
Sbjct: 63 actatctggtacgacattccagaacgt 89
>37371_dvi-mir-277:mirbase
Length = 89
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatc-caaagcatgtaaatgc 65
||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaaagcttgtaaatgc 62
Query: 66 attatttggtacgacattccagaacgt 92
| ||| |||||||||||||||||||||
Sbjct: 63 actatctggtacgacattccagaacgt 89
>35207_aae-mir-277:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tgtaaatgcattatttggtacgacattccagaa 89
|||||||||| ||| ||||||||||||||||||
Sbjct: 60 tgtaaatgcactatctggtacgacattccagaa 92
>35302_aga-mir-277:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tgtaaatgcattatttggtacgacattccagaa 89
|||||||||| ||| ||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgacattccagaa 89
>36035_cqu-mir-277:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 57 tgtaaatgcattatttggtacgacattccagaa 89
|||||||||| ||| ||||||||||||||||||
Sbjct: 61 tgtaaatgcactatctggtacgacattccagaa 93
>35077_api-mir-277:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 49 ccaaagcatgtaaatgcattatttggtacgaca 81
||||| |||||||||||| ||| ||||||||||
Sbjct: 47 ccaaatcatgtaaatgcactatctggtacgaca 79
