miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36428_dme-mir-282:mirbase
Length = 97
Score = 184 bits (93), Expect = 8e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1 agtttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
Query: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
>36429_dme-mir-282:mirbase
Length = 97
Score = 184 bits (93), Expect = 8e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1 agtttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttccttctaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
Query: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
>37163_dse-mir-282:mirbase
Length = 97
Score = 184 bits (93), Expect = 8e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 1 agtttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
Query: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
||||||||||||||||||||||||||||||| |||||
Sbjct: 61 catagcctataagaggttaggtgtaccaaggtgaaca 97
>36203_der-mir-282:mirbase
Length = 97
Score = 176 bits (89), Expect = 2e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 1 agtttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcaga 60
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 agtttccttataaatctagcctctactaggctttgtctgtgcattcaaaagccgatcaga 60
Query: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 catagcctataagaggttaggtgtaccaaggcgaaca 97
>37532_dya-mir-282:mirbase
Length = 90
Score = 159 bits (80), Expect = 4e-40
Identities = 86/88 (97%)
Strand = Plus / Plus
Query: 4 ttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacat 63
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttccttataaatctagcctctactaggctttgtctgtgcatacgaaagccgatcagacat 60
Query: 64 agcctataagaggttaggtgtaccaagg 91
||||||||||||||||||||||||||||
Sbjct: 61 agcctataagaggttaggtgtaccaagg 88
>36125_dan-mir-282:mirbase
Length = 90
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 4 ttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacat 63
|||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 ttccttatagatctagcctctactaggctttgtctgtgcattcgaaagtcgatcagacat 60
Query: 64 agcctataagaggttaggtgtaccaaggcg 93
||||||||||||||||||||||||||||||
Sbjct: 61 agcctataagaggttaggtgtaccaaggcg 90
>36877_dpe-mir-282:mirbase
Length = 91
Score = 133 bits (67), Expect = 3e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 ccttttaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
Query: 65 gcctataagaggttaggtgtaccaagg 91
|||||||||||||||||||||||||||
Sbjct: 63 gcctataagaggttaggtgtaccaagg 89
>36957_dps-mir-282:mirbase
Length = 94
Score = 133 bits (67), Expect = 3e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 6 ccttttaaatctagcctctactaggctttgtctgtgcattcgaaagcc-gatcagacata 64
|||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 3 ccttataaatctagcctctactaggctttgtctgtgcatttgaaaacccgatcagacata 62
Query: 65 gcctataagaggttaggtgtaccaagg 91
|||||||||||||||||||||||||||
Sbjct: 63 gcctataagaggttaggtgtaccaagg 89
>37377_dvi-mir-282:mirbase
Length = 94
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 3 tttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagaca 62
||||||| |||||||||||||||||||||||||||||||||||||| | || |||||||
Sbjct: 3 tttccttataaatctagcctctactaggctttgtctgtgcattcgatatacggtcagaca 62
Query: 63 tagcctataagaggttaggtgtaccaagg 91
|||||||| ||||||||||||||||||||
Sbjct: 63 tagcctatgagaggttaggtgtaccaagg 91
>36800_dmo-mir-282:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 81/89 (91%)
Strand = Plus / Plus
Query: 3 tttccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagaca 62
||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 1 tttccttataaatctagcctctactaggctttgtctgtgcatttgatataagatcagaca 60
Query: 63 tagcctataagaggttaggtgtaccaagg 91
|||||||| |||||||||||||| |||||
Sbjct: 61 tagcctatgagaggttaggtgtagcaagg 89
>37456_dwi-mir-282:mirbase
Length = 87
Score = 93.7 bits (47), Expect = 2e-20
Identities = 77/87 (88%), Gaps = 5/87 (5%)
Strand = Plus / Plus
Query: 5 tccttttaaatctagcctctactaggctttgtctgtgcattcgaaagccgatcagacata 64
||||| ||||||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 3 tccttataaatctagcctctactaggctttgtctgtgcatttgga-----ttcagacata 57
Query: 65 gcctataagaggttaggtgtaccaagg 91
|||||| ||||||||||||||||||||
Sbjct: 58 gcctatgagaggttaggtgtaccaagg 84
>36292_dgr-mir-282:mirbase
Length = 94
Score = 83.8 bits (42), Expect = 2e-17
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 4 ttccttttaaatctagcctctactaggctttgtctgtgca--ttcgaaagccgatcagac 61
|||||| ||||||||||||||||||||||||||||||||| || || | |||||||
Sbjct: 1 ttccttataaatctagcctctactaggctttgtctgtgcactttttcaattcaatcagac 60
Query: 62 atagcctataagaggttaggtgtac 86
||||||||| |||||||||||||||
Sbjct: 61 atagcctatgagaggttaggtgtac 85
>35211_aae-mir-282-1:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 aatctagcctctactaggctttgtctgt 40
|||||||||||| |||||||||||||||
Sbjct: 29 aatctagcctctcctaggctttgtctgt 56
>35212_aae-mir-282-2:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 aatctagcctctactaggctttgtctgt 40
|||||||||||| |||||||||||||||
Sbjct: 29 aatctagcctctcctaggctttgtctgt 56
>35306_aga-mir-282:mirbase
Length = 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 aatctagcctctactaggctttgtctgt 40
|||||||||||| |||||||||||||||
Sbjct: 12 aatctagcctcttctaggctttgtctgt 39
>37783_tca-mir-282:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tagcctctactaggctttgtctgtg 41
|||||||| ||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgtg 33
>37784_tca-mir-282:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 tagcctctactaggctttgtctgtg 41
|||||||| ||||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgtg 33
>35387_ame-mir-282:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 tagcctctactaggctttgtctgt 40
|||||||| |||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
>37621_nlo-mir-282:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 tagcctctactaggctttgtctgt 40
|||||||| |||||||||||||||
Sbjct: 6 tagcctctcctaggctttgtctgt 29
>37664_nvi-mir-282:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 17 tagcctctactaggctttgtctgt 40
|||||||| |||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
