miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00726;mir-87;AAPU01010611.1/255409-255311 7230:Drosophila
mojavensis
Length = 99
Score = 151 bits (76), Expect = 2e-36
Identities = 85/88 (96%)
Strand = Plus / Plus
Query: 5 tttcattcgcgcctgtatcttgctgaaccgttacaattgagacatctaaatccggttgag 64
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 6 tttcattcgcgcctgtatcttgctgaaccgttacaattgtcacatccaaatccggttgag 65
Query: 65 caaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||
Sbjct: 66 caaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AAQB01006452.1/3553-3454 7260:Drosophila
willistoni
Length = 100
Score = 115 bits (58), Expect = 1e-25
Identities = 88/94 (93%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgtta-caattgaga-catctaaatccg 58
||||||||||||||||||||||||||||||||||||| |||||| || |||| | ||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccaattgtgatcatc-atttccg 60
Query: 59 gttgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgagcaaaatttcaggtgtgtgagaaatttgt 94
>RF00726;mir-87;AAPP01015726.1/103266-103169 7217:Drosophila
ananassae
Length = 98
Score = 103 bits (52), Expect = 4e-22
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttacaattgagacatctaaatccggt 60
|||||||||||||||||||||||||||||||||||||| | | || | ||||||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgttaccgatatggca-cagaatccggt 60
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||
Sbjct: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
>RF00726;mir-87;AADE01000150.1/47415-47513 46245:Drosophila
pseudoobscura pseudoobscura
Length = 99
Score = 79.8 bits (40), Expect = 6e-15
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 1 catatttcattcgcgcctgtatcttgctgaaccgttacaattgagacatctaaatccggt 60
||||||||||||||||||||||||||||||||||| | || | | | | |||||
Sbjct: 2 catatttcattcgcgcctgtatcttgctgaaccgtagccataatggtctttcatcccggt 61
Query: 61 tgagcaaaatttcaggtgtgtgagaaatttgt 92
||||||||||||||||||||||||||||||||
Sbjct: 62 tgagcaaaatttcaggtgtgtgagaaatttgt 93
>RF00726;mir-87;AASW01042897.1/1205-1302 7240:Drosophila simulans
Length = 98
Score = 69.9 bits (35), Expect = 5e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 54 atccggttgagcaaaatttcaggtgtgtgagaaat 88
|||||||||||||||||||||||||||||||||||
Sbjct: 54 atccggttgagcaaaatttcaggtgtgtgagaaat 88
