miRNEST 2.0, an integrative microRNA resource :: BLAST
>41215_crt-MIR168:mirbase
Length = 201
Score = 210 bits (106), Expect = 3e-55
Identities = 158/184 (85%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctagnnnnnnn 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctagttttttt 60
Query: 65 nnnnnnnnnnnngacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaattttttgacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatga 120
Query: 125 ttgnnnnnnntgcgaattggatcccgccttgcatcaactgaatcggagaccgaggtgaga 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgaaaaaaatgcgaattggatcccgccttgcatcaactgaatcggagaccgaggtgaga 180
Query: 185 gatt 188
||||
Sbjct: 181 gatt 184
>41210_ccl-MIR168:mirbase
Length = 176
Score = 194 bits (98), Expect = 2e-50
Identities = 150/176 (85%)
Strand = Plus / Plus
Query: 6 gttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctagnnnnnnnn 65
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggctagtttttttt 60
Query: 66 nnnnnnnnnnngacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgat 125
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaattttttgacagcgaggtggcgtgttgtaattggtcgtcacgtttaaattaatgat 120
Query: 126 tgnnnnnnntgcgaattggatcccgccttgcatcaactgaatcggagaccgaggtg 181
|| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaaaaaatgcgaattggatcccgccttgcatcaactgaatcggagaccgaggtg 176
>41101_tcc-MIR168:mirbase
Length = 167
Score = 101 bits (51), Expect = 2e-22
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 55
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 51
Score = 85.7 bits (43), Expect = 1e-17
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 137 cgaattggatcccgccttgcatcaactgaatcggagaccgaggtgag 183
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcggtgag 163
>40044_ath-MIR168b:mirbase
Length = 124
Score = 81.8 bits (41), Expect = 2e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 7 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 55
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggct 49
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 146 tcccgccttgcatcaactgaatcggagaccgaggtga 182
||||| |||| |||||||||||||||| |||||||||
Sbjct: 88 tcccgtcttgtatcaactgaatcggagtccgaggtga 124
>39833_aly-MIR168b:mirbase
Length = 176
Score = 77.8 bits (39), Expect = 3e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 5 agttaccggcggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 23 agttaccggcggtctcggattcgcttggtgcaggtcgggaactgatt 69
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 144 gatcccgccttgcatcaactgaatcggagaccgaggtga 182
||||||| |||| |||||||||||||||| |||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggagtccgaggtga 148
>40448_gma-MIR168:mirbase
Length = 125
Score = 75.8 bits (38), Expect = 1e-14
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 137 cgaattggatcccgccttgcatcaactgaatcggagaccgaggtga 182
|||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcggtga 123
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 gcggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgatt 51
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgatt 37
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 138 gaattggatcccgccttgcatcaactgaatcggaga 173
||||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggaga 136
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 136 gcgaattggatcccgccttgcatcaactgaatcggag 172
|||||||||||||||||||||||||||||||||||||
Sbjct: 123 gcgaattggatcccgccttgcatcaactgaatcggag 159
Score = 65.9 bits (33), Expect = 1e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaactgatt 51
||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgatt 37
>40355_rco-MIR168:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 2e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 20 ctaattcgcttggtgcaggtcgggaactgattggct 55
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaattcgcttggtgcaggtcgggaactgattggct 36
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 138 gaattggatcccgccttgcatcaactgaatcg 169
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 65.9 bits (33), Expect = 1e-11
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 11 cggcggtctctaattcgcttggtgcaggtcgggaactgattggct 55
|||||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgattggct 48
Score = 40.1 bits (20), Expect = 6e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggagaccgaggtga 182
||||||||||||| ||||| |||||| ||| |||| ||||
Sbjct: 94 ggatcccgccttgtatcaagtgaatccgagtccgacgtga 133
>41596_vvi-MIR168:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 15 ggtctctaattcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 144 gatcccgccttgcatcaactgaatcggagac 174
|||||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 140 attggatcccgccttgcatcaactgaatcgga 171
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 140 attggatcccgccttgcatcaactgaatcgga 171
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 23 attcgcttggtgcaggtcgggaac 46
||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaac 45
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 143 ggatcccgccttgcatcaactgaatcggag 172
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
