miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 103 bits (52), Expect = 3e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 2 ctaaaaggaacgatcgttgtgatatgcgttagattcaccgttatatatcacagtgatttt 61
|||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 2 ctaaaaggaacgatcgttgtgatatgcgttc-attaaccgttacatatcacagtgatttt 60
Query: 62 cctttatagcgc 73
||||||||||||
Sbjct: 61 cctttatagcgc 72
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 54.0 bits (27), Expect = 2e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 gctaaaaggaacgatcgttgtgatatg 27
|||||||||||||||||||||||||||
Sbjct: 1 gctaaaaggaacgatcgttgtgatatg 27
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 atatcacagtgattttcctttata 69
||||||||||||||||||||||||
Sbjct: 41 atatcacagtgattttcctttata 64
