miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01901;mir-284;AAPU01011034.1/21117-21020 7230:Drosophila
          mojavensis
          Length = 98

 Score =  117 bits (59), Expect = 3e-26
 Identities = 90/99 (90%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
          ||||||||||||||||| ||||||||||||| |||||| ||||| |||||||  ||||||
Sbjct: 1  gttgcagttcctggaataaagttgactgtgtcgcctgtaagggg-aaggcttttgcattg 59

                                                 
Query: 61 catactaagtcagcaacttgattccagcaattgcggccc 99
          | ||| |||||||||||||||||||||||| ||||||||
Sbjct: 60 cttacaaagtcagcaacttgattccagcaactgcggccc 98




>RF01901;mir-284;AASR01017048.1/711-808 7240:Drosophila simulans
          Length = 98

 Score =  103 bits (52), Expect = 4e-22
 Identities = 91/100 (91%), Gaps = 3/100 (3%)
 Strand = Plus / Plus

                                                                      
Query: 1  gttgcagttcctggaattaagttgactgtgtagcctgttaggggaaaggcttgagcattg 60
          |||||||||||||||||||||||||||||||||||||| | ||| |||||||||  | ||
Sbjct: 1  gttgcagttcctggaattaagttgactgtgtagcctgtga-gggcaaggcttgaatactg 59

                                                  
Query: 61 catact-aagtcagcaacttgattccagcaattgcggccc 99
          | | || |||||||||||||||||||||||||||||||||
Sbjct: 60 c-tcctgaagtcagcaacttgattccagcaattgcggccc 98