miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00854;mir-5;AASS01023484.1/3619-3686 7240:Drosophila simulans
Length = 68
Score = 93.7 bits (47), Expect = 2e-19
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgttattccctaacatatcacagtgattttccttt 60
||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgagttgttccc-aacatatcacagtgattttccttt 61
Query: 61 ata 63
|||
Sbjct: 62 ata 64
>RF00854;mir-5;AANI01014795.1/39532-39603 7244:Drosophila virilis
Length = 72
Score = 77.8 bits (39), Expect = 1e-14
Identities = 61/66 (92%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtt-att--ccctaacatatcacagtgattttcc 57
||||||||||||||||||||||||||||| ||| || | ||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttcc 62
Query: 58 tttata 63
||||||
Sbjct: 63 tttata 68
