miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36355_dme-mir-11:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>36356_dme-mir-11:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>37130_dse-mir-11:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>37206_dsi-mir-11:mirbase
Length = 75
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gcacttgtcaagaactttctctgtgacccgcgtgtacttaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgag 72
||||||||||||
Sbjct: 61 gttcttgctgag 72
>36170_der-mir-11:mirbase
Length = 75
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 gcacttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctga 60
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gcacttgccaagaactttctctgtgacctgcgtgtactgaaaagccgcatcacagtctga 60
Query: 61 gttcttgctgagcgc 75
|||||||||||||||
Sbjct: 61 gttcttgctgagcgc 75
>36841_dpe-mir-11:mirbase
Length = 71
Score = 63.9 bits (32), Expect = 1e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 4 cttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctgagtt 63
|||||||||||||| ||||||||||||||| || | ||| ||||||||||||||||
Sbjct: 3 cttgtcaagaacttattctgtgacctgcgtgacattta--gccacatcacagtctgagtt 60
Query: 64 cttgctgagcg 74
|||||||||||
Sbjct: 61 cttgctgagcg 71
>36917_dps-mir-11:mirbase
Length = 71
Score = 63.9 bits (32), Expect = 1e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 4 cttgtcaagaactttctctgtgacctgcgtgtacttaaaagccgcatcacagtctgagtt 63
|||||||||||||| ||||||||||||||| || | ||| ||||||||||||||||
Sbjct: 3 cttgtcaagaacttattctgtgacctgcgtgacattta--gccacatcacagtctgagtt 60
Query: 64 cttgctgagcg 74
|||||||||||
Sbjct: 61 cttgctgagcg 71
>37421_dwi-mir-11:mirbase
Length = 82
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgctgagcg 74
||||||||||||||||||||||||||||||
Sbjct: 53 ccgcatcacagtctgagttcttgctgagcg 82
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 4 cttgtcaagaactttctctgtgacctgcgtg 34
|||||||||| || |||||||||||||||||
Sbjct: 2 cttgtcaagatctctctctgtgacctgcgtg 32
>36258_dgr-mir-11:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 46 cgcatcacagtctgagttcttgctgagcg 74
|||||||||||||||||||||||||||||
Sbjct: 51 cgcatcacagtctgagttcttgctgagcg 79
>36768_dmo-mir-11:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgctgagcgc 75
||||||||||||||||||||||||| |||||
Sbjct: 51 ccgcatcacagtctgagttcttgcttagcgc 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 caagaactttctctgtgacctgcgtg 34
|||||||||| |||||||||||||||
Sbjct: 9 caagaactttttctgtgacctgcgtg 34
>37344_dvi-mir-11:mirbase
Length = 81
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 45 ccgcatcacagtctgagttcttgctgagcgc 75
||||||||||||||||||||||||| |||||
Sbjct: 51 ccgcatcacagtctgagttcttgcttagcgc 81
>36092_dan-mir-11:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgctgag 72
|||||||||||||||||||||||||
Sbjct: 52 catcacagtctgagttcttgctgag 76
>35178_aae-mir-11:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 67 catcacagtctgagttcttgct 88
>35279_aga-mir-11:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 63 catcacagtctgagttcttgct 84
>36009_cqu-mir-11:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 48 catcacagtctgagttcttgct 69
||||||||||||||||||||||
Sbjct: 52 catcacagtctgagttcttgct 73
