miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36373_dme-mir-34:mirbase
Length = 99
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 63
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttcacagccactatcttcactgccgccgcgacaagc 99
>36374_dme-mir-34:mirbase
Length = 99
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 63
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttcacagccactatcttcactgccgccgcgacaagc 99
>37139_dse-mir-34:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
>37215_dsi-mir-34:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
>36850_dpe-mir-34:mirbase
Length = 97
Score = 153 bits (77), Expect = 3e-38
Identities = 93/97 (95%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttgaca 59
|||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 60
Query: 60 attcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcacagccactatcttcactgccgccgcgacaagc 97
>36926_dps-mir-34:mirbase
Length = 100
Score = 153 bits (77), Expect = 3e-38
Identities = 93/97 (95%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagcc-aattattgccgttgaca 59
|||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||
Sbjct: 4 tggctatgcgctttggcagtgtggttagctggttgtgtagccaaaatattgcctttgacc 63
Query: 60 attcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||||
Sbjct: 64 attcacagccactatcttcactgccgccgcgacaagc 100
>36179_der-mir-34:mirbase
Length = 96
Score = 151 bits (76), Expect = 1e-37
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaatcattgcttgtgacaa 60
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcacagccactatcttcactgccgccgcgacaagc 96
>37353_dvi-mir-34:mirbase
Length = 87
Score = 111 bits (56), Expect = 9e-26
Identities = 85/96 (88%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
|||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggccaa---------ttgacaa 51
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||
Sbjct: 52 atcacagccactatcttcactgccgccgcgacaagc 87
>36267_dgr-mir-34:mirbase
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 84/96 (87%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
|||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggccaa---------ctgacaa 51
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||
Sbjct: 52 atcacagccactatcttcactgccgccgcgacaagc 87
>37430_dwi-mir-34:mirbase
Length = 100
Score = 97.6 bits (49), Expect = 1e-21
Identities = 88/98 (89%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaatt--attgccgttgac 58
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattaaattgcc-aaaac 59
Query: 59 aat---tcacagccactatcttcactgccgccgcgaca 93
||| |||||||||||||||||||||||||||||||
Sbjct: 60 aataaaccacagccactatcttcactgccgccgcgaca 97
>36777_dmo-mir-34:mirbase
Length = 87
Score = 95.6 bits (48), Expect = 5e-21
Identities = 83/96 (86%), Gaps = 9/96 (9%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgccgttgacaa 60
|||||||||||||||||||||||||||||||||||||| |||| |||| ||
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtggcca---------cttgaaaa 51
Query: 61 ttcacagccactatcttcactgccgccgcgacaagc 96
|||||||||||||||||||||||||||||||||||
Sbjct: 52 atcacagccactatcttcactgccgccgcgacaagc 87
>36101_dan-mir-34:mirbase
Length = 97
Score = 93.7 bits (47), Expect = 2e-20
Identities = 89/101 (88%), Gaps = 9/101 (8%)
Strand = Plus / Plus
Query: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagccaattattgc-cgttgac- 58
||||||||||||||||||||||||||||||||||||||||| | ||| ||||| |
Sbjct: 1 tggctatgcgctttggcagtgtggttagctggttgtgtagc----tggtgctcgttggca 56
Query: 59 ---aattcacagccactatcttcactgccgccgcgacaagc 96
||||||||||||||||||||||||||||||||||||||
Sbjct: 57 attaattcacagccactatcttcactgccgccgcgacaagc 97
>37645_nvi-mir-34:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtgtagc 41
|||||||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgtgtagc 48
>35184_aae-mir-34:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 9 cgctttggcagtgtggttagctggttgtgtag 40
|||| |||||||||||||||||||||||||||
Sbjct: 11 cgctatggcagtgtggttagctggttgtgtag 42
>37576_ngi-mir-34:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtgtag 40
||||||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgtgtag 34
>37608_nlo-mir-34:mirbase
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtgtag 40
||||||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgtgtag 34
>35531_bmo-mir-34:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtgta 39
|||||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgtgta 46
>35283_aga-mir-34:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 cgctttggcagtgtggttagctggttgtgt 38
|||| |||||||||||||||||||||||||
Sbjct: 12 cgctctggcagtgtggttagctggttgtgt 41
>35005_dpu-mir-34:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtg 37
|||||||||||||||||||||||||
Sbjct: 21 ttggcagtgtggttagctggttgtg 45
>37723_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgtgt 38
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>37724_tca-mir-34:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgtgt 38
|||||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>38739_cte-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgtg 37
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
>34870_sko-mir-34:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgt 36
|||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgt 44
>38100_bma-mir-34:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgt 36
|||||||||||||||||||||||
Sbjct: 23 tggcagtgtggttagctggttgt 45
>35054_api-mir-34:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggttgtgta 39
|||||||||| |||||||||||||||
Sbjct: 1 tggcagtgtgattagctggttgtgta 26
>35358_ame-mir-34:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ttggcagtgtggttagctggttgtgt 38
|||||||||| |||||||||||||||
Sbjct: 20 ttggcagtgttgttagctggttgtgt 45
>38488_crm-mir-34:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ggcagtgtggttagctggttg 35
|||||||||||||||||||||
Sbjct: 16 ggcagtgtggttagctggttg 36
>38127_cbr-mir-34:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ggcagtgtggttagctggttg 35
|||||||||||||||||||||
Sbjct: 19 ggcagtgtggttagctggttg 39
>38268_cel-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 ggcagtgtggttagctggttg 35
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>38858_lgi-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 tggcagtgtggttagctggt 33
||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggt 41
