miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36182_der-mir-92a:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgc 60
Query: 61 acttgtcccggcctatgggcggtttgtaat 90
||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcccggcctatgggcggtttgtaat 90
>36379_dme-mir-92a:mirbase
Length = 95
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgc 60
Query: 61 acttgtcccggcctatgggcggtttgtaat 90
||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcccggcctatgggcggtttgtaat 90
>36380_dme-mir-92a:mirbase
Length = 95
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgc 60
Query: 61 acttgtcccggcctatgggcggtttgtaat 90
||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcccggcctatgggcggtttgtaat 90
>37142_dse-mir-92a:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgc 60
Query: 61 acttgtcccggcctatgggcggtttgtaat 90
||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcccggcctatgggcggtttgtaat 90
>37217_dsi-mir-92a:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aatatgaatttcccgtaggacgggaaggtgtcaacgttttgcatttcgaataaacattgc 60
Query: 61 acttgtcccggcctatgggcggtttgtaat 90
||||||||||||||||||||||||||||||
Sbjct: 61 acttgtcccggcctatgggcggtttgtaat 90
>36853_dpe-mir-92a:mirbase
Length = 85
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 12 cccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgcacttgtcccgg 71
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 10 cccgtaggacgggaaggtgtcaacgttttacattttgaacaaacattgcacttgtcccgg 69
Query: 72 cctatgggcggtttgt 87
||||||||||| ||||
Sbjct: 70 cctatgggcggcttgt 85
>36270_dgr-mir-92a:mirbase
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 17 aggacgggaaggtgtcaacgttttgcattttgaat-aaacattgcacttgtcccggccta 75
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 14 aggacgggaaggtgtcaacgttttgcattttgaatcaaacattgcacttgtcccggccta 73
Query: 76 tgggcggtttgt 87
|| |||||||||
Sbjct: 74 tgagcggtttgt 85
>36929_dps-mir-92a:mirbase
Length = 94
Score = 119 bits (60), Expect = 4e-28
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 12 cccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgcacttgtcccgg 71
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 11 cccgtaggacgggaaggtgtcaacgttttaaattttgaacaaacattgcacttgtcccgg 70
Query: 72 cctatgggcggtttgt 87
||||||||||| ||||
Sbjct: 71 cctatgggcggcttgt 86
>37435_dwi-mir-92a:mirbase
Length = 81
Score = 113 bits (57), Expect = 2e-26
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 7 aatttcccgtaggacgggaaggtgtcaacgttttgcattttgaat-aaacattgcacttg 65
|||||| ||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 1 aatttctcgtaggacgggaaggtgtcaacgttttgccttatgaatcaaacattgcacttg 60
Query: 66 tcccggcctatgggcggtttg 86
|||||||||||| ||||||||
Sbjct: 61 tcccggcctatgagcggtttg 81
>36104_dan-mir-92a:mirbase
Length = 87
Score = 105 bits (53), Expect = 5e-24
Identities = 75/81 (92%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 7 aatttcccgtaggacgggaaggtgtcaacgttttgcattttgaataaacattgcacttgt 66
|||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||||
Sbjct: 6 aatttcccgtaggacgggaaggtgtcaaggttttgaattaa-attaaacattgcacttgt 64
Query: 67 cccggcctatgggcggtttgt 87
|||||||||||||||||||||
Sbjct: 65 cccggcctatgggcggtttgt 85
>37356_dvi-mir-92a:mirbase
Length = 81
Score = 101 bits (51), Expect = 8e-23
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 17 aggacgggaaggtgtcaacgttttgcattttgaat-aaacattgcacttgtcccggccta 75
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 11 aggacgggaaggtgtcaacgttttgctttatgaatcaaacattgcacttgtcccggccta 70
Query: 76 tgggcggtttg 86
|| ||||||||
Sbjct: 71 tgagcggtttg 81
>36780_dmo-mir-92a:mirbase
Length = 89
Score = 91.7 bits (46), Expect = 8e-20
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 17 aggacgggaaggtgtcaacgttttgcattttgaat-aaacattgcacttgtcccggccta 75
|||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||
Sbjct: 16 aggacgggaaggtgtcaacgttttaccttttgattcaaacattgcacttgtcccggccta 75
Query: 76 tgggcggttt 85
|| |||||||
Sbjct: 76 tgagcggttt 85
>35188_aae-mir-92a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctatg 77
||||||||||||||||||||||
Sbjct: 53 attgcacttgtcccggcctatg 74
>35286_aga-mir-92a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctatg 77
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>36018_cqu-mir-92-1:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctatg 77
||||||||||||||||||||||
Sbjct: 55 attgcacttgtcccggcctatg 76
>36019_cqu-mir-92-2:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctatg 77
||||||||||||||||||||||
Sbjct: 52 attgcacttgtcccggcctatg 73
>35363_ame-mir-92a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctat 76
|||||||||||||||||||||
Sbjct: 64 attgcacttgtcccggcctat 84
>37577_ngi-mir-92a:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctat 76
|||||||||||||||||||||
Sbjct: 58 attgcacttgtcccggcctat 78
>37609_nlo-mir-92a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctat 76
|||||||||||||||||||||
Sbjct: 58 attgcacttgtcccggcctat 78
>37647_nvi-mir-92a:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctat 76
|||||||||||||||||||||
Sbjct: 63 attgcacttgtcccggcctat 83
>25748_xtr-mir-92a-2:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggcctatggg 79
||||||||||||||||||| ||||
Sbjct: 47 attgcacttgtcccggcctgtggg 70
>34818_spu-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggccta 75
||||||||||||||||||||
Sbjct: 62 attgcacttgtcccggccta 81
>34873_sko-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 attgcacttgtcccggccta 75
||||||||||||||||||||
Sbjct: 62 attgcacttgtcccggccta 81
