miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36202_der-mir-281-2:mirbase
Length = 92
Score = 159 bits (80), Expect = 4e-40
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaataccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 153 bits (77), Expect = 3e-38
Identities = 90/93 (96%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagtta-ataccaattgtaatac 59
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatataccgattgtaatac 60
Query: 60 tgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatggaattgctctctttgtataatattcg 93
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 151 bits (76), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 151 bits (76), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 151 bits (76), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 1 cgaattgtgaaatgaagagagctatccgtcgacagtcaagttaagaccgattgtaatact 60
Query: 61 gtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||| |||||
Sbjct: 61 gtcatggaattgctctctttgtataacattcg 92
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 143 bits (72), Expect = 2e-35
Identities = 88/92 (95%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat-cagattgtaatact 59
Query: 61 gtcatggaattgctctctttgtataatattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 60 gtcatggaattgctctctttgtataatattcg 91
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 143 bits (72), Expect = 2e-35
Identities = 88/92 (95%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 1 cgaatagtgaaataaagagagctatccgtcgacagtcaagttaat-cagattgtaatact 59
Query: 61 gtcatggaattgctctctttgtataatattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 60 gtcatggaattgctctctttgtataatattcg 91
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 137 bits (69), Expect = 2e-33
Identities = 88/93 (94%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagtta-ataccaattgtaatac 59
||||||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagttatatacatattttaatac 60
Query: 60 tgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatggaattgctctctttgtataatattcg 93
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 135 bits (68), Expect = 6e-33
Identities = 87/92 (94%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaataccaattgtaatact 60
||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtcaagcta-tacagattgtaatact 59
Query: 61 gtcatggaattgctctctttgtataatattcg 92
||||||||||||||||||||||||||||||||
Sbjct: 60 gtcatggaattgctctctttgtataatattcg 91
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 133 bits (67), Expect = 2e-32
Identities = 88/94 (93%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaatacca--attgtaata 58
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagttaaaacacggattgtaata 60
Query: 59 ctgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||| |||||
Sbjct: 61 ctgtcatggaattgctctctttgtataacattcg 94
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 119 bits (60), Expect = 4e-28
Identities = 89/97 (91%), Gaps = 5/97 (5%)
Strand = Plus / Plus
Query: 1 cgaatagtgaaatgaagagagctatccgtcgacagtcaagtt-aatacc----aattgta 55
||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||
Sbjct: 1 cgaatagcgaaatgaagagagctatccgtcgacagtccagtttaatacatccgaattgta 60
Query: 56 atactgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 atactgtcatggaattgctctctttgtataatattcg 97
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/78 (91%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtcaacgta---ccaatt-taatactgtcatggaattgct 70
Query: 75 ctctttgtataatattcg 92
||||||||||||||||||
Sbjct: 71 ctctttgtataatattcg 88
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/78 (91%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtcaacgta---ccaatt-taatactgtcatggaattgct 70
Query: 75 ctctttgtataatattcg 92
||||||||||||||||||
Sbjct: 71 ctctttgtataatattcg 88
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 81.8 bits (41), Expect = 8e-17
Identities = 69/78 (88%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| ||| | ||| |||||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagtaa----caaatgtaatactgtcatggaattgct 70
Query: 75 ctctttgtataatattcg 92
|||||||||| |||||||
Sbjct: 71 ctctttgtatgatattcg 88
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/78 (89%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| ||| ||| |||| |||||||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt--ata--aattttaatactgtcatggaattgct 70
Query: 75 ctctttgtataatattcg 92
|||||||||| |||||||
Sbjct: 71 ctctttgtatgatattcg 88
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/78 (88%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| |||||| | ||| ||| |||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagttaaa--cgattttaaaactgtcatggaattgct 72
Query: 75 ctctttgtataatattcg 92
|||||||||| |||||||
Sbjct: 73 ctctttgtatgatattcg 90
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 73.8 bits (37), Expect = 2e-14
Identities = 68/78 (87%), Gaps = 4/78 (5%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagtcaagttaataccaattgtaatactgtcatggaattgct 74
||||||||| ||||||||||||| ||| || | |||||| |||||||||||||||||
Sbjct: 15 aagagagctgtccgtcgacagtccagtaaaga----ttgtaaaactgtcatggaattgct 70
Query: 75 ctctttgtataatattcg 92
|||||||||| |||||||
Sbjct: 71 ctctttgtatgatattcg 88
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 52 actgtcatggaattgctctctttgtataatattcg 86
>36201_der-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37238_dsi-mir-281:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgtataatattcg 92
|||||||||||||||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctctttgtataatattcg 90
>37781_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>37782_tca-mir-281:mirbase
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||||||||||||||||||||||||||
Sbjct: 5 aaatgaagagagctatccgtcgacagt 31
>35557_bmo-mir-281:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 aatgaagagagctatccgtcgacagt 36
||||||||||||||||||||||||||
Sbjct: 7 aatgaagagagctatccgtcgacagt 32
>25355_odi-mir-281:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 aatactgtcatggaattgctctctt 79
|||||||||||||||||||||||||
Sbjct: 61 aatactgtcatggaattgctctctt 85
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 16 aaataaagagagctatccgtcgacagt 42
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 15 aaataaagagagctatccgtcgacagt 41
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 55 actgtcatggaattgctctcttt 77
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 aaatgaagagagctatccgtcgacagt 36
|||| ||||||||||||||||||||||
Sbjct: 21 aaataaagagagctatccgtcgacagt 47
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 61 actgtcatggaattgctctcttt 83
>38122_bma-mir-281:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctcttt 80
|||||||||||||||||||||||
Sbjct: 51 actgtcatggaattgctctcttt 73
>38884_lgi-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 aatactgtcatggaattgctctcttt 80
|||||||||||||| |||||||||||
Sbjct: 56 aatactgtcatggagttgctctcttt 81
>35081_api-mir-281:mirbase
Length = 62
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>35386_ame-mir-281:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgta 83
||||||||||| ||||||||||||||
Sbjct: 59 actgtcatggagttgctctctttgta 84
>37566_lmi-mir-281:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 aagagagctatccgtcgacagt 36
||||||||||||||||||||||
Sbjct: 1 aagagagctatccgtcgacagt 22
>37589_ngi-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37620_nlo-mir-281:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 45 actgtcatggacttgctctctttgt 69
>37663_nvi-mir-281:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 58 actgtcatggaattgctctctttgt 82
||||||||||| |||||||||||||
Sbjct: 59 actgtcatggacttgctctctttgt 83
