miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00637;mir-276;AAZO01003220.1/6657-6747 121224:Pediculus humanus
corporis (human body louse)
Length = 91
Score = 67.9 bits (34), Expect = 1e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgtg-tgttgttatagtaggaacttcataccgtgctct 58
|||||||||||||||||||||||| | | |||| |||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgtgctttggttactgtaggaacttcataccgtgctct 74
>RF00637;mir-276;AADG05002822.1/76702-76793 7460:Apis mellifera
(honey bee)
Length = 92
Score = 67.9 bits (34), Expect = 1e-11
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgt-gtgttgttatagtaggaacttcataccgtgctct 58
||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgtagtgttcagaaagtaggaacttcataccgtgctct 75
>RF00637;mir-276;AADK01021256.1/890-979 7091:Bombyx mori (domestic
silkworm)
Length = 90
Score = 60.0 bits (30), Expect = 3e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1 tagcgaggtatagagttcctacgtgtgttgttatagtaggaacttcataccgtgctct 58
|||||||||||||||||||||||| || | | |||||||||||||||||||||||
Sbjct: 16 tagcgaggtatagagttcctacgtatgctaacactgtaggaacttcataccgtgctct 73
>RF00637;mir-276;AAZX01001999.1/5300-5391 7425:Nasonia vitripennis
(jewel wasp)
Length = 92
Score = 52.0 bits (26), Expect = 7e-07
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgt-gtgttgttatagtaggaacttcataccgtgctct 58
||||||||||||||||||||||| | || | ||||||||||||||||||||||||
Sbjct: 18 agcgaggtatagagttcctacgtagatttcagaaagtaggaacttcataccgtgctct 75
>RF00637;mir-276;AAJJ01000143.1/58311-58223 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tagcgaggtatagagttcctacgtg 25
|||||||||||||||||||||||||
Sbjct: 14 tagcgaggtatagagttcctacgtg 38
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gtaggaacttcataccgtgctct 58
|||||||||||||||||||||||
Sbjct: 50 gtaggaacttcataccgtgctct 72
>RF00637;mir-276;ABLF01003513.1/4658-4754 7029:Acyrthosiphon pisum
(pea aphid)
Length = 97
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tagcgaggtatagagttcctacgt 24
||||||||||||||||||||||||
Sbjct: 15 tagcgaggtatagagttcctacgt 38
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gtaggaacttcataccgtgctct 58
|||||||||||||||||||||||
Sbjct: 59 gtaggaacttcataccgtgctct 81
>RF00637;mir-276;AADE01001409.1/12453-12359 46245:Drosophila
pseudoobscura pseudoobscura
Length = 95
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgtg 25
||||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgtg 42
>RF00637;mir-276;AAPU01011641.1/29322-29227 7230:Drosophila
mojavensis
Length = 96
Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgtg 25
||||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgtg 42
>RF00637;mir-276;AAGE02007617.1/38970-39063 7159:Aedes aegypti
(yellow fever mosquito)
Length = 94
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgt 24
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gtaggaacttcataccgtgctct 58
|||||||||||||||||||||||
Sbjct: 56 gtaggaacttcataccgtgctct 78
>RF00637;mir-276;ABKQ02021477.1/23012-22918 377270:Anopheles
gambiae S
Length = 95
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gtaggaacttcataccgtgctct 58
|||||||||||||||||||||||
Sbjct: 57 gtaggaacttcataccgtgctct 79
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacg 23
||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacg 38
>RF00637;mir-276;AE014296.4/10312890-10312983 7227:Drosophila
melanogaster (fruit fly)
Length = 94
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgt 24
|||||||||||||||||||||||
Sbjct: 19 agcgaggtatagagttcctacgt 41
>RF00637;mir-276;AANI01017424.1/110847-110939 7244:Drosophila
virilis
Length = 93
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 agcgaggtatagagttcctacgt 24
|||||||||||||||||||||||
Sbjct: 17 agcgaggtatagagttcctacgt 39
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 gtaggaacttcataccgtgctct 58
|||||||||||||||||||||||
Sbjct: 55 gtaggaacttcataccgtgctct 77
>RF00637;mir-276;AAWU01010561.1/6178-6274 7176:Culex
quinquefasciatus (southern house mosquito)
Length = 97
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 taggaacttcataccgtgctct 58
||||||||||||||||||||||
Sbjct: 60 taggaacttcataccgtgctct 81
Score = 42.1 bits (21), Expect = 7e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagcgaggtatagagttccta 21
|||||||||||||||||||||
Sbjct: 15 tagcgaggtatagagttccta 35
>RF00637;mir-276;AAGE02000417.1/11129-11035 7159:Aedes aegypti
(yellow fever mosquito)
Length = 95
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 taggaacttcataccgtgctct 58
||||||||||||||||||||||
Sbjct: 58 taggaacttcataccgtgctct 79
>RF00637;mir-276;ABKP02026752.1/53325-53226 377271:Anopheles
gambiae M
Length = 100
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 taggaacttcataccgtgctct 58
||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctct 84
>RF00637;mir-276;ABKQ02021479.1/6963-6864 377270:Anopheles gambiae
S
Length = 100
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 37 taggaacttcataccgtgctct 58
||||||||||||||||||||||
Sbjct: 63 taggaacttcataccgtgctct 84
