miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37613_nlo-mir-184:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60
Query: 61 agaactgataagggcccgagggttacaga 89
|||||||||||||||||||||||||||||
Sbjct: 61 agaactgataagggcccgagggttacaga 89
>37653_nvi-mir-184:mirbase
Length = 92
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 62
Query: 61 agaactgataagggcccgagggttacaga 89
|||||||||||||||||||||||||||||
Sbjct: 63 agaactgataagggcccgagggttacaga 91
>35371_ame-mir-184:mirbase
Length = 92
Score = 89.7 bits (45), Expect = 3e-19
Identities = 78/89 (87%)
Strand = Plus / Plus
Query: 1 cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60
|||||| |||||||||||||||||||||||| |||| || | | ||||||||||||
Sbjct: 3 cgtgcccaaagccccttatcattctcctgtccggtgtagaattgttagacgactggacgg 62
Query: 61 agaactgataagggcccgagggttacaga 89
||||||||||||||||||||||| |||||
Sbjct: 63 agaactgataagggcccgagggtcacaga 91
>35196_aae-mir-184:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 cgactggacggagaactgataagggcccg 78
|||||||||||||||||||||||||||||
Sbjct: 51 cgactggacggagaactgataagggcccg 79
>36025_cqu-mir-184:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 50 cgactggacggagaactgataagggcccg 78
|||||||||||||||||||||||||||||
Sbjct: 48 cgactggacggagaactgataagggcccg 76
>35293_aga-mir-184:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggcccg 78
|||||||||||||||||||||||||||
Sbjct: 49 actggacggagaactgataagggcccg 75
>24688_bfl-mir-184:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 53 ctggacggagaactgataagggcccg 78
||||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggcccg 85
>38757_cte-mir-184a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggcc 76
|||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggcc 83
>38873_lgi-mir-184:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggc 82
>35065_api-mir-184a:mirbase
Length = 65
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 36 actggacggagaactgataagggc 59
>35541_bmo-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 50 actggacggagaactgataagggc 73
>36110_dan-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>36188_der-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>36277_dgr-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>36393_dme-mir-184:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggc 82
>36394_dme-mir-184:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggc 82
>36786_dmo-mir-184:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 57 actggacggagaactgataagggc 80
>36862_dpe-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>36937_dps-mir-184:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggc 82
>37148_dse-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>37224_dsi-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>37362_dvi-mir-184:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 57 actggacggagaactgataagggc 80
>37441_dwi-mir-184:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76
>37516_dya-mir-184:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 52 actggacggagaactgataagggc 75
>37747_tca-mir-184:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 47 actggacggagaactgataagggc 70
>37748_tca-mir-184:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataagggc 75
||||||||||||||||||||||||
Sbjct: 47 actggacggagaactgataagggc 70
>34829_spu-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 ctggacggagaactgataagggc 75
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>34885_sko-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 ctggacggagaactgataagggc 75
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>34975_isc-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 ctggacggagaactgataagggc 75
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>24844_cin-mir-184:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataagggc 75
||||||||||||||||||||||
Sbjct: 66 tggacggagaactgataagggc 87
>34335_dre-mir-184:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataagggc 75
||||||||||||||||||||||
Sbjct: 55 tggacggagaactgataagggc 76
>34336_dre-mir-184-2:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataagggc 75
||||||||||||||||||||||
Sbjct: 49 tggacggagaactgataagggc 70
>25979_gga-mir-184:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>26487_tgu-mir-184:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 81 tggacggagaactgataaggg 101
>26739_cfa-mir-184:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 42 tggacggagaactgataaggg 62
>27065_eca-mir-184:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 46 tggacggagaactgataaggg 66
>27408_mdo-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>27775_mml-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28225_mne-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28491_hsa-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30259_ptr-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30873_ppy-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>31900_mmu-mir-184:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 45 tggacggagaactgataaggg 65
>32770_rno-mir-184:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 47 tggacggagaactgataaggg 67
>33252_bta-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34014_ssc-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34616_fru-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>34763_tni-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataaggg 74
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>25809_xtr-mir-184:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tggacggagaactgataagg 73
||||||||||||||||||||
Sbjct: 53 tggacggagaactgataagg 72
>35066_api-mir-184b:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 52 actggacggagaactgataa 71
||||||||||||||||||||
Sbjct: 37 actggacggagaactgataa 56
