miRNEST 2.0, an integrative microRNA resource :: BLAST
>46783_miR319:micropc
Length = 173
Score = 174 bits (88), Expect = 2e-44
Identities = 155/174 (89%), Gaps = 5/174 (2%)
Strand = Plus / Plus
Query: 10 gagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactcattca 69
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgtccttcagtccactcatgggcggtgctagggtcgaattagctgccgactcattca 60
Query: 70 cccacatgccaagca--aacggccatggaaacc--agctttgcagatgagtgaatgaagc 125
||||||||||||||| || || || | | ||||| |||||||||||||||||||
Sbjct: 61 cccacatgccaagcaagaaacgcttgagatagcgaagcttagcagatgagtgaatgaagc 120
Query: 126 gggaggtaaaagcttcgatctcgcaccgtctttgcttggactgaagggtgctcc 179
||||||| || | | ||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 gggaggt-aacgttccgatctcgcgccgtctttgcttggactgaagggtgctcc 173
>45419_miR319:micropc
Length = 176
Score = 60.0 bits (30), Expect = 6e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 8 gagagcgtccttcagtccactcaggggcggtgctagggtcgaattagctgccgactcatt 67
|||||| | |||||||||||||| ||| || | |||||| |||||||||||||||||||
Sbjct: 1 gagagctttcttcagtccactcatgggtggcggtagggtttaattagctgccgactcatt 60
Query: 68 ca 69
||
Sbjct: 61 ca 62
>46724_miR319:micropc
Length = 173
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 17 cttcagtccactcaggggcggtgctagggtcgaattagctgccgactcattca 69
|||||||||||||| ||| || | |||||| |||||||||||||||||||||
Sbjct: 8 cttcagtccactcatgggtggcggtagggtttaattagctgccgactcattca 60
>46473_miR159:micropc
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 17 cttcagtccactcaggggcggtgctagggtcgaattagctgccgactcattca 69
|||||||||||||| ||| || | |||||| |||||||||||||||||||||
Sbjct: 8 cttcagtccactcatgggtggcggtagggtttaattagctgccgactcattca 60
>45333_miR319:micropc
Length = 173
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 17 cttcagtccactcaggggcggtgctagggtcgaattagctgccgactcattca 69
|||||||||||||| ||| || | |||||| |||||||||||||||||||||
Sbjct: 8 cttcagtccactcatgggtggcggtagggtttaattagctgccgactcattca 60
>46813_miR319:micropc
Length = 172
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 43 aattagctgccgactcattcatccaaatgc 72
>46740_miR319:micropc
Length = 170
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 42 aattagctgccgactcattcatccaaatgc 71
>46608_miR319:micropc
Length = 167
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 40 aattagctgccgactcattcatccaaatgc 69
>46559_miR319:micropc
Length = 166
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 41 aattagctgccgactcattcatccaaatgc 70
>45829_miR319:micropc
Length = 167
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 40 aattagctgccgactcattcatccaaatgc 69
>45735_miR319:micropc
Length = 166
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 41 aattagctgccgactcattcatccaaatgc 70
>45431_miR319:micropc
Length = 166
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 41 aattagctgccgactcattcatccaaatgc 70
>44987_miR159:micropc
Length = 166
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattcacccacatgc 78
||||||||||||||||||||| ||| ||||
Sbjct: 40 aattagctgccgactcattcatccaaatgc 69
>46667_miR159:micropc
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 40 aattagctgccgactcattca 60
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 96 gcagatgagtgaatgatgcgggag 119
>46399_miR319:micropc
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 42 aattagctgccgactcattca 62
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 98 gcagatgagtgaatgatgcgggag 121
>45262_miR319:micropc
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 43 aattagctgccgactcattca 63
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 99 gcagatgagtgaatgatgcgggag 122
>44834_miR159:micropc
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 40 aattagctgccgactcattca 60
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 96 gcagatgagtgaatgatgcgggag 119
>44802_miR319:micropc
Length = 165
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 49 aattagctgccgactcattca 69
|||||||||||||||||||||
Sbjct: 40 aattagctgccgactcattca 60
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 107 gcagatgagtgaatgaagcgggag 130
|||||||||||||||| |||||||
Sbjct: 96 gcagatgagtgaatgatgcgggag 119
>46095_miR319:micropc
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 158 tgcttggactgaagggtgctccct 181
|||||||||||||||| |||||||
Sbjct: 149 tgcttggactgaagggagctccct 172
