miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;ABXC01001402.1/46929-46689 4558:Sorghum bicolor
(sorghum)
Length = 241
Score = 48.1 bits (24), Expect = 6e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 39 tttgactttttcaatcctaactttgagcactcgttttattcaaaacatttgt 90
||||||||||| | ||||| ||||| ||||||| |||||||||| ||||||
Sbjct: 212 tttgactttttttaccctaagtttgaccactcgtcttattcaaaaaatttgt 161
>RF01062;MIR812;AP004573.3/131013-131180 39947:Oryza sativa
Japonica Group
Length = 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 tttgagcactcgttttattcaaaacatttgt 90
||||| |||||||||||||||||| ||||||
Sbjct: 17 tttgaccactcgttttattcaaaaaatttgt 47
>RF01062;MIR812;AP008210.1/16558865-16558698 39947:Oryza sativa
Japonica Group
Length = 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 tttgagcactcgttttattcaaaacatttgt 90
||||| ||||||| |||||||||||||||||
Sbjct: 17 tttgaccactcgtcttattcaaaacatttgt 47
>RF01062;MIR812;AACV01016979.1/4172-4005 39947:Oryza sativa
Japonica Group
Length = 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 tttgagcactcgttttattcaaaacatttgt 90
||||| |||||||||||||||||| ||||||
Sbjct: 17 tttgaccactcgttttattcaaaaaatttgt 47
