miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37724_tca-mir-34:mirbase
Length = 79
Score = 115 bits (58), Expect = 5e-27
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 1 atgtacacggtggcagtgtggttagctggttgtgnnnnnnngatcacgaccactatccat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 atgtacacggtggcagtgtggttagctggttgtgtttttttgatcacgaccactatccat 60
Query: 61 actccctccatgaatatcg 79
|||||||||||||||||||
Sbjct: 61 actccctccatgaatatcg 79
>38100_bma-mir-34:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 ggtggcagtgtggttagctggttgt 33
|||||||||||||||||||||||||
Sbjct: 21 ggtggcagtgtggttagctggttgt 45
>38739_cte-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
>34870_sko-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gtggcagtgtggttagctggttgt 33
||||||||||||||||||||||||
Sbjct: 21 gtggcagtgtggttagctggttgt 44
>35005_dpu-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
>35184_aae-mir-34:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgtg 39
>35283_aga-mir-34:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtg 40
>35531_bmo-mir-34:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 21 tggcagtgtggttagctggttgtg 44
>36101_dan-mir-34:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>36179_der-mir-34:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>36267_dgr-mir-34:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>36373_dme-mir-34:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtg 40
>36374_dme-mir-34:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtg 40
>36777_dmo-mir-34:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>36850_dpe-mir-34:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>36926_dps-mir-34:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtg 40
>37139_dse-mir-34:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>37215_dsi-mir-34:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>37353_dvi-mir-34:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>37430_dwi-mir-34:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>37507_dya-mir-34:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 14 tggcagtgtggttagctggttgtg 37
>37576_ngi-mir-34:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 8 tggcagtgtggttagctggttgtg 31
>37608_nlo-mir-34:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 8 tggcagtgtggttagctggttgtg 31
>37645_nvi-mir-34:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||||||||||||||||||
Sbjct: 21 tggcagtgtggttagctggttgtg 44
>38858_lgi-mir-34:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 gtggcagtgtggttagctggt 30
|||||||||||||||||||||
Sbjct: 21 gtggcagtgtggttagctggt 41
>38488_crm-mir-34:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ggcagtgtggttagctggttg 32
|||||||||||||||||||||
Sbjct: 16 ggcagtgtggttagctggttg 36
>38127_cbr-mir-34:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ggcagtgtggttagctggttg 32
|||||||||||||||||||||
Sbjct: 19 ggcagtgtggttagctggttg 39
>38268_cel-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ggcagtgtggttagctggttg 32
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>35054_api-mir-34:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
|||||||||| |||||||||||||
Sbjct: 1 tggcagtgtgattagctggttgtg 24
>35358_ame-mir-34:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 tggcagtgtggttagctggttgtg 34
||||||||| ||||||||||||||
Sbjct: 21 tggcagtgttgttagctggttgtg 44
