miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00694;mir-137;AAJJ01002111.1/15264-15166 7070:Tribolium
castaneum (red flour beetle)
Length = 99
Score = 153 bits (77), Expect = 4e-37
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 tggttggtcacgtgtattcttgggtaattaacacatattcagggatgttattgcttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tggttggtcacgtgtattcttgggtaattaacacatattcagggatgttattgcttgaga 71
Query: 61 atacacgtagctgacaa 77
|||||||||||||||||
Sbjct: 72 atacacgtagctgacaa 88
>RF00694;mir-137;AAZO01004444.1/55394-55292 121224:Pediculus
humanus corporis (human body louse)
Length = 103
Score = 89.7 bits (45), Expect = 5e-18
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 1 tggttggtcacgtgtattcttgggtaattaacacatattcagggatgttattgcttgaga 60
|||||||||||| ||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 14 tggttggtcacgcgtattcttggggaattaacacaccaaaagagatgttattgcttgaga 73
Query: 61 atacacgtagctgacaa 77
|||||||||||||||||
Sbjct: 74 atacacgtagctgacaa 90
>RF00694;mir-137;BAAB01088495.1/2035-1935 7091:Bombyx mori
(domestic silkworm)
Length = 101
Score = 87.7 bits (44), Expect = 2e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 6 ggtcacgtgtattcttgggtaattaacacatattcagggatgttattgcttgagaataca 65
||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 18 ggtcacgcgtattcttggggaattaacacatatgt-gagatgttattgcttgagaataca 76
Query: 66 cgtagctgacaa 77
||||||||||||
Sbjct: 77 cgtagctgacaa 88
>RF00694;mir-137;AAGE02029705.1/92443-92543 7159:Aedes aegypti
(yellow fever mosquito)
Length = 101
Score = 60.0 bits (30), Expect = 4e-09
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 1 tggttggtcacgtgtattcttgggtaattaacaca-tattcagggatgttattgcttgag 59
||||||| |||| |||||||||||| ||||||||| | || | | ||||||||||||||
Sbjct: 13 tggttggccacgcgtattcttgggttattaacacactgtttatgt-tgttattgcttgag 71
Query: 60 aatacacgtagctgacaa 77
||||||||||| ||||||
Sbjct: 72 aatacacgtagttgacaa 89
>RF00694;mir-137;ABLF01001266.1/4970-5069 7029:Acyrthosiphon pisum
(pea aphid)
Length = 100
Score = 58.0 bits (29), Expect = 2e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 29 taacacatattcagggatgttattgcttgagaatacacgtagctgacaa 77
||||||||||| | | ||||||||||||||||||||||||| ||||||
Sbjct: 40 taacacatatttaagactgttattgcttgagaatacacgtagttgacaa 88
>RF00694;mir-137;AADG05005118.1/28931-28831 7460:Apis mellifera
(honey bee)
Length = 101
Score = 58.0 bits (29), Expect = 2e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 14 gtattcttgggtaattaacacatattcagggatgttattgcttgagaatacacgtag 70
||||||||||| |||||||||| ||| | | |||||||||||||||||||||||||
Sbjct: 26 gtattcttggggaattaacacacattt-gcgctgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAGJ02120953.1/3113-3013 7668:Strongylocentrotus
purpuratus
Length = 101
Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 gatgttattgcttgagaatacacgtag 70
|||||||||||||||||||||||||||
Sbjct: 56 gatgttattgcttgagaatacacgtag 82
>RF00694;mir-137;BAAF04063265.1/5995-5897 8090:Oryzias latipes
(Japanese medaka)
Length = 99
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 44 gatgttattgcttgagaatacacgtagctga 74
||||||||||||||||||||| |||||||||
Sbjct: 54 gatgttattgcttgagaatacgcgtagctga 84
>RF00694;mir-137;ABKQ02013341.1/3039-2937 377270:Anopheles gambiae
S
Length = 103
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 46 tgttattgcttgagaatacacgtagctgac 75
||||||||||||||||||||||||| ||||
Sbjct: 58 tgttattgcttgagaatacacgtagttgac 87
>RF00694;mir-137;AAQB01009904.1/3815-3716 7260:Drosophila
willistoni
Length = 100
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFS01000057.1/187400-187500 46245:Drosophila
pseudoobscura pseudoobscura
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AAPP01018794.1/261725-261826 7217:Drosophila
ananassae
Length = 102
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AASR01013769.1/615-715 7240:Drosophila simulans
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 56 atgttattgcttgagaatacacgtag 81
>RF00694;mir-137;AANI01011213.1/2061-1961 7244:Drosophila virilis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAPU01010131.1/289658-289758 7230:Drosophila
mojavensis
Length = 101
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 45 atgttattgcttgagaatacacgtag 70
||||||||||||||||||||||||||
Sbjct: 57 atgttattgcttgagaatacacgtag 82
>RF00694;mir-137;AAFR03049204.1/9121-9021 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 101
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 46 tgttattgcttgagaatacacgtag 70
|||||||||||||||||||||||||
Sbjct: 56 tgttattgcttgagaatacacgtag 80
>RF00694;mir-137;CAAE01013623.1/560-657 99883:Tetraodon
nigroviridis
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 ggatgttattgcttgagaatacacgtag 70
|||||||||||||||||||||| |||||
Sbjct: 53 ggatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABPK01025702.1/584-484 57307:Labeotropheus
fuelleborni
Length = 101
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 ggatgttattgcttgagaatacacgtag 70
|||||||||||||||||||||| |||||
Sbjct: 54 ggatgttattgcttgagaatacgcgtag 81
>RF00694;mir-137;BAAF04031315.1/5933-5836 8090:Oryzias latipes
(Japanese medaka)
Length = 98
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 43 ggatgttattgcttgagaatacacgtag 70
|||||||||||||||||||||| |||||
Sbjct: 53 ggatgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABJB010513068.1/3224-3122 6945:Ixodes scapularis
(black-legged tick)
Length = 103
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 46 tgttattgcttgagaatacacgt 68
|||||||||||||||||||||||
Sbjct: 59 tgttattgcttgagaatacacgt 81
>RF00694;mir-137;AAPN01296459.1/4449-4348 9258:Ornithorhynchus
anatinus (platypus)
Length = 102
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgttattgcttgagaatacacgtag 70
||||||||||||||||||| |||||
Sbjct: 56 tgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;AAWZ01010620.1/48359-48459 28377:Anolis
carolinensis (green anole)
Length = 101
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 46 tgttattgcttgagaatacacgtag 70
||||||||||||||||||| |||||
Sbjct: 56 tgttattgcttgagaatacgcgtag 80
>RF00694;mir-137;ABEP02015958.1/3058-2959 7739:Branchiostoma
floridae (Florida lancelet)
Length = 100
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ttattgcttgagaatacacgt 68
|||||||||||||||||||||
Sbjct: 59 ttattgcttgagaatacacgt 79
