miRNEST 2.0, an integrative microRNA resource :: BLAST
>42741_zma-MIR168a:mirbase
Length = 104
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 69
Query: 61 gccttgcaccaagtgaatcggagcc 85
|||||||||||||||||||||||||
Sbjct: 70 gccttgcaccaagtgaatcggagcc 94
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 66
Query: 61 gccttgcaccaagtgaatcggagcc 85
|||||||||||||||||||||||||
Sbjct: 67 gccttgcaccaagtgaatcggagcc 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatccc 69
Query: 61 gccttgcaccaagtgaatcggagcc 85
|||||||||||||||||||||||||
Sbjct: 70 gccttgcaccaagtgaatcggagcc 94
>42742_zma-MIR168b:mirbase
Length = 104
Score = 153 bits (77), Expect = 2e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 5 ctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgcct 73
Query: 65 tgcaccaagtgaatcggagcc 85
|||| ||||||||||||||||
Sbjct: 74 tgcatcaagtgaatcggagcc 94
>42460_sof-MIR168b:mirbase
Length = 103
Score = 139 bits (70), Expect = 4e-34
Identities = 77/78 (98%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 gggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 75
Query: 68 accaagtgaatcggagcc 85
||||||||||||||||||
Sbjct: 76 accaagtgaatcggagcc 93
>41888_hvu-MIR168:mirbase
Length = 106
Score = 131 bits (66), Expect = 9e-32
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccg-gccgacgggacggatcc 59
|||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 12 ccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcc 71
Query: 60 cgccttgcaccaagtgaatcggagcc 85
||||||||||||||||||||||||||
Sbjct: 72 cgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 131 bits (66), Expect = 9e-32
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccg-gccgacgggacggatcc 59
|||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 12 ccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcc 71
Query: 60 cgccttgcaccaagtgaatcggagcc 85
||||||||||||||||||||||||||
Sbjct: 72 cgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 119 bits (60), Expect = 3e-28
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccg--gccgacgggacggatc 58
|||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||
Sbjct: 20 ccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatc 79
Query: 59 ccgccttgcaccaagtgaatcggagcc 85
|||||||||||||||||||||||||||
Sbjct: 80 ccgccttgcaccaagtgaatcggagcc 106
>41962_osa-MIR168a:mirbase
Length = 87
Score = 107 bits (54), Expect = 1e-24
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 2 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 59
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 60 cgccttgcaccaagtgaatcggagcc 85
||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 107 bits (54), Expect = 1e-24
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 2 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 59
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 60 cgccttgcaccaagtgaatcggagcc 85
||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagcc 86
>42528_sbi-MIR168:mirbase
Length = 106
Score = 103 bits (52), Expect = 2e-23
Identities = 79/87 (90%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatc 58
||||||||||||||||||||||||||||||||| |||||| | | |||||||| ||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 69
Query: 59 ccgccttgcaccaagtgaatcggagcc 85
||||||||||||||||||||| |||||
Sbjct: 70 ccgccttgcaccaagtgaatccgagcc 96
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 139 ggatcccgccttgcatcaactgaatcggag 168
>41210_ccl-MIR168:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 138 ggatcccgccttgcatcaactgaatcggag 167
>41101_tcc-MIR168:mirbase
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 123 ggatcccgccttgcatcaactgaatcggag 152
>40448_gma-MIR168:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcggag 83
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>41596_vvi-MIR168:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 55 gatcccgccttgcaccaagtgaatcggag 83
|||||||||||||| ||| ||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
>40043_ath-MIR168a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcgga 82
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
>39832_aly-MIR168a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcgga 82
||||||||||||||| ||| |||||||||
Sbjct: 105 ggatcccgccttgcatcaactgaatcgga 133
>40355_rco-MIR168:mirbase
Length = 131
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 54 ggatcccgccttgcaccaagtgaatcg 80
||||||||||||||| ||| |||||||
Sbjct: 102 ggatcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 53 cggatcccgccttgcaccaagtgaatc 79
|||||||||||||| | ||||||||||
Sbjct: 93 cggatcccgccttgtatcaagtgaatc 119
