miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00728;mir-81;AAQA01000482.1/18100-18000 6279:Brugia malayi
Length = 101
Score = 180 bits (91), Expect = 2e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 ggtgggggcagtaggccttcaccatgatctacagaatgctatcattttgagtctgagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggtgggggcagtaggccttcaccatgatctacagaatgctatcattttgagtctgagatc 69
Query: 61 attgtgaaagctatttgccttctaccgtctc 91
|||||||||||||||||||||||||||||||
Sbjct: 70 attgtgaaagctatttgccttctaccgtctc 100
>RF00727;bantam;AAZX01004974.1/17134-17222 7425:Nasonia
vitripennis (jewel wasp)
Length = 89
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 tttgagtctgagatcattgtgaaagct 72
||||| |||||||||||||||||||||
Sbjct: 44 tttgattctgagatcattgtgaaagct 70
>RF00727;bantam;AAJJ01000881.1/39195-39283 7070:Tribolium
castaneum (red flour beetle)
Length = 89
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 tttgagtctgagatcattgtgaaagct 72
||||| |||||||||||||||||||||
Sbjct: 44 tttgattctgagatcattgtgaaagct 70
>RF00727;bantam;ABJB010305858.1/1270-1184 6945:Ixodes scapularis
(black-legged tick)
Length = 87
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 agtctgagatcattgtgaaagct 72
|||||||||||||||||||||||
Sbjct: 49 agtctgagatcattgtgaaagct 71
>RF00727;bantam;ABLF01005214.1/5435-5342 7029:Acyrthosiphon pisum
(pea aphid)
Length = 94
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tctgagatcattgtgaaagcta 73
||||||||||||||||||||||
Sbjct: 55 tctgagatcattgtgaaagcta 76
>RF00727;bantam;AADK01008828.1/6468-6379 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tctgagatcattgtgaaagcta 73
||||||||||||||||||||||
Sbjct: 51 tctgagatcattgtgaaagcta 72
