miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00711;mir-449;AAQA01000334.1/14819-14733 6279:Brugia malayi
Length = 87
Score = 172 bits (87), Expect = 6e-43
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 8 cggggatttaccgggtggcagtgtggttagctggttgtcagcatatcggacaacggctat 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggggatttaccgggtggcagtgtggttagctggttgtcagcatatcggacaacggctat 60
Query: 68 catcactgccgtcctggttttcctaaa 94
|||||||||||||||||||||||||||
Sbjct: 61 catcactgccgtcctggttttcctaaa 87
>RF00711;mir-449;AAJJ01000475.1/25339-25252 7070:Tribolium
castaneum (red flour beetle)
Length = 88
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 ggtggcagtgtggttagctggttgt 45
|||||||||||||||||||||||||
Sbjct: 14 ggtggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAZO01004205.1/1293-1391 121224:Pediculus humanus
corporis (human body louse)
Length = 99
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;BABH01019946.1/3350-3261 7091:Bombyx mori
(domestic silkworm)
Length = 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAZX01003771.1/10900-10991 7425:Nasonia
vitripennis (jewel wasp)
Length = 92
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAGE02012646.1/4275-4404 7159:Aedes aegypti
(yellow fever mosquito)
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;ABKQ02014207.1/244697-244790 377270:Anopheles
gambiae S
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgt 39
>RF00711;mir-449;AAPQ01006467.1/383882-383780 7220:Drosophila
erecta
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAQB01008630.1/408110-408004 7260:Drosophila
willistoni
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAFS01000411.1/37510-37407 46245:Drosophila
pseudoobscura pseudoobscura
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AAPP01019533.1/13885-13988 7217:Drosophila
ananassae
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AASS01031694.1/773-875 7240:Drosophila simulans
Length = 103
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;AANI01014607.1/367710-367617 7244:Drosophila
virilis
Length = 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 tggcagtgtggttagctggttgt 45
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>RF00711;mir-449;ABLE02004150.1/46650-46564 281687:Caenorhabditis
japonica
Length = 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 cgggtggcagtgtggttagctggttg 44
|||| |||||||||||||||||||||
Sbjct: 12 cgggaggcagtgtggttagctggttg 37
