miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00824;mir-50;AAQA01001434.1/1796-1718 6279:Brugia malayi
          Length = 79

 Score =  155 bits (78), Expect = 1e-37
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                      
Query: 14 atgcagtgttgatatgtctgatattcttgggttgtgcaaagtcaaccagcatctcagacg 73
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atgcagtgttgatatgtctgatattcttgggttgtgcaaagtcaaccagcatctcagacg 60

                            
Query: 74 tatcggccactgtgtatt 91
          ||||||||||||||||||
Sbjct: 61 tatcggccactgtgtatt 78




>RF00824;mir-50;CAAC02000589.1/893157-893260 6238:Caenorhabditis
          briggsae
          Length = 104

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 23 tgatatgtctgatattcttgggtt 46
          ||||||||||||||||||||||||
Sbjct: 18 tgatatgtctgatattcttgggtt 41