miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38153_cbr-mir-43:mirbase
          Length = 95

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                      
Query: 15 gcccgtgacatcaagaaactagtgattatgccaaaccacagggacatatcacagtttact 74
          ||||||||||||||||  || |||||||||| |||     ||||||||||||||||||||
Sbjct: 11 gcccgtgacatcaagatgcttgtgattatgcgaaaatgttgggacatatcacagtttact 70

                         
Query: 75 tgctgtcgcgggcgg 89
          ||||||||| |||||
Sbjct: 71 tgctgtcgcaggcgg 85




>38506_crm-mir-43:mirbase
          Length = 100

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                
Query: 54 agggacatatcacagtttacttgctgtcgcgggcggtg 91
          |||||||||||||||||||||||||||||| |||||||
Sbjct: 56 agggacatatcacagtttacttgctgtcgcaggcggtg 93