miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38280_cel-mir-44:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 gagaaaatggccaatctggatgtgctcgttggtcatagacgtcaacacgaactgttcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaaaatggccaatctggatgtgctcgttggtcatagacgtcaacacgaactgttcata 60
Query: 61 tgactagagacacattcagcttggcctgcttctcta 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgactagagacacattcagcttggcctgcttctcta 96
>38507_crm-mir-44:mirbase
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Plus
Query: 1 gagaaaatggccaatctggatgtgctcgttggtcatagacg--tcaacacgaactgttca 58
|||| ||||||| ||||||||||||||||| |||||||||| ||| ||| || ||
Sbjct: 2 gagagaatggccgatctggatgtgctcgttagtcatagacgaatcacagaaaacagt-ca 60
Query: 59 tatgactagagacacattcagcttggcctg 88
||||||||||||||||||||||||||||||
Sbjct: 61 tatgactagagacacattcagcttggcctg 90
>38154_cbr-mir-44:mirbase
Length = 95
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 56 tcatatgactagagacacattcagcttggcctg 88
|||||||||||||||||||||||||||||||||
Sbjct: 56 tcatatgactagagacacattcagcttggcctg 88
>38508_crm-mir-45:mirbase
Length = 109
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttggc 85
|||||||||||||||||||||||||||
Sbjct: 66 tatgactagagacacattcagcttggc 92
>38155_cbr-mir-45-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttggc 85
|||||||||||||||||||||||||||
Sbjct: 53 tatgactagagacacattcagcttggc 79
>38156_cbr-mir-45-2:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttggc 85
|||||||||||||||||||||||||||
Sbjct: 53 tatgactagagacacattcagcttggc 79
>38281_cel-mir-45:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttggc 85
|||||||||||||||||||||||||||
Sbjct: 59 tatgactagagacacattcagcttggc 85
>38282_cel-mir-45:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttggc 85
|||||||||||||||||||||||||||
Sbjct: 59 tatgactagagacacattcagcttggc 85
>38602_ppc-mir-45:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 tatgactagagacacattcagcttgg 84
||||||||||||||||||||||||||
Sbjct: 61 tatgactagagacacattcagcttgg 86
