miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00791;mir-357;AF016431.1/1453-1344 6239:Caenorhabditis elegans
Length = 110
Score = 218 bits (110), Expect = 1e-56
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 acgctgtactactcaccagcggatccctacaacgctgcgcatatgcatgaacacaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgctgtactactcaccagcggatccctacaacgctgcgcatatgcatgaacacaatgaa 60
Query: 61 aatgtaaatgccagtcgttgcaggagttcgcatacagtagtaaaatgcgc 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgtaaatgccagtcgttgcaggagttcgcatacagtagtaaaatgcgc 110
>RF00791;mir-357;ABEG01006163.1/1657-1549 135651:Caenorhabditis
brenneri
Length = 109
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 aatgtaaatgccagtcgttgcaggagttcgc 91
||||||||||||||||||||||||| |||||
Sbjct: 60 aatgtaaatgccagtcgttgcaggaattcgc 90
>RF00791;mir-357;ABEG01002539.1/24698-24590 135651:Caenorhabditis
brenneri
Length = 109
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 61 aatgtaaatgccagtcgttgcaggagttcgc 91
||||||||||||||||||||||||| |||||
Sbjct: 60 aatgtaaatgccagtcgttgcaggaattcgc 90
>RF00791;mir-357;AAGD02001646.1/15527-15437 31234:Caenorhabditis
remanei
Length = 91
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 61 aatgtaaatgccagtcgttgcaggagttcg 90
||||||||||||||||||||| ||| ||||
Sbjct: 54 aatgtaaatgccagtcgttgctggaattcg 83
