miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00790;mir-358;AF022973.2/41094-40983 6239:Caenorhabditis elegans
Length = 112
Score = 218 bits (110), Expect = 1e-56
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 aaactcgcgacggctggcgacctggccaggcattccaactgtcaaacttacaaagctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaactcgcgacggctggcgacctggccaggcattccaactgtcaaacttacaaagctttc 60
Query: 61 tcgacaattggtatccctgtcaaggtctcaatccgttcagcgaattcgtt 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgacaattggtatccctgtcaaggtctcaatccgttcagcgaattcgtt 110
>RF00790;mir-358;AAGD02001646.1/15888-15778 31234:Caenorhabditis
remanei
Length = 111
Score = 67.9 bits (34), Expect = 3e-11
Identities = 71/81 (87%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 15 tggcgacctggccaggcattccaactgtcaaacttacaaagctttctcg-acaattggta 73
||||||||||||||||||||||||||||| | | | | |||| ||| ||||||||||
Sbjct: 15 tggcgacctggccaggcattccaactgtccatccaagta--ctttatcggacaattggta 72
Query: 74 tccctgtcaaggtctcaatcc 94
|||||||||||||||||||||
Sbjct: 73 tccctgtcaaggtctcaatcc 93
