miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38264_cel-lin-4:mirbase
          Length = 94

 Score =  121 bits (61), Expect = 1e-28
 Identities = 85/93 (91%)
 Strand = Plus / Plus

                                                                       
Query: 9   atgctttcggcctgctccctgagacctcaagtgtgagcgcactgttgatgcttcacgcct 68
           |||||| ||||||| |||||||||||||||||||||| | ||| |||||||||||| |||
Sbjct: 1   atgcttccggcctgttccctgagacctcaagtgtgagtgtactattgatgcttcacacct 60

                                            
Query: 69  gggctctctgggtaccaggacggcttgagcaga 101
           |||||||| |||||||||||||| |||||||||
Sbjct: 61  gggctctccgggtaccaggacggtttgagcaga 93




>38124_cbr-lin-4:mirbase
          Length = 94

 Score =  111 bits (56), Expect = 1e-25
 Identities = 77/84 (91%)
 Strand = Plus / Plus

                                                                      
Query: 8  gatgctttcggcctgctccctgagacctcaagtgtgagcgcactgttgatgcttcacgcc 67
          ||||||||||||||| ||||||||||||||||||||||||  |||   ||||||||||||
Sbjct: 5  gatgctttcggcctgttccctgagacctcaagtgtgagcgttctgaacatgcttcacgcc 64

                                  
Query: 68 tgggctctctgggtaccaggacgg 91
          ||||||||| ||||||||||||||
Sbjct: 65 tgggctctccgggtaccaggacgg 88