miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38268_cel-mir-34:mirbase
Length = 97
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 7 tgctcgagaggcagtgtggttagctggttgcatattgaattgacaacggctaccttcact 66
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8 tgctcgagaggcagtgtggttagctggttgcatatttccttgacaacggctaccttcact 67
Query: 67 gccaccccgaacatgtagtcca 88
|||||||||||||||| |||||
Sbjct: 68 gccaccccgaacatgtcgtcca 89
>38127_cbr-mir-34:mirbase
Length = 93
Score = 101 bits (51), Expect = 8e-23
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 14 gaggcagtgtggttagctggttgcatattgaa-ttgacaacggctaccttcactgccacc 72
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 17 gaggcagtgtggttagctggttgcatacacaggttgacaacggctaccttcactgccacc 76
Query: 73 ccgaacatgtagtcc 87
|||||||||||||||
Sbjct: 77 ccgaacatgtagtcc 91
>35531_bmo-mir-34:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttgcatattgaattgacaac 53
||||||||||||||||||||| ||| ||| |||||||
Sbjct: 22 ggcagtgtggttagctggttgtgtatggaaatgacaac 59
>38739_cte-mir-34:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 23 ggcagtgtggttagctggttg 43
>34870_sko-mir-34:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 23 ggcagtgtggttagctggttg 43
>35005_dpu-mir-34:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 23 ggcagtgtggttagctggttg 43
>35184_aae-mir-34:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>35283_aga-mir-34:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 18 ggcagtgtggttagctggttg 38
>36101_dan-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>36179_der-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>36267_dgr-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>36373_dme-mir-34:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 18 ggcagtgtggttagctggttg 38
>36374_dme-mir-34:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 18 ggcagtgtggttagctggttg 38
>36777_dmo-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>36850_dpe-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>36926_dps-mir-34:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 18 ggcagtgtggttagctggttg 38
>37139_dse-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>37215_dsi-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>37353_dvi-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>37430_dwi-mir-34:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>37507_dya-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 15 ggcagtgtggttagctggttg 35
>37576_ngi-mir-34:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 9 ggcagtgtggttagctggttg 29
>37608_nlo-mir-34:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 9 ggcagtgtggttagctggttg 29
>37645_nvi-mir-34:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 22 ggcagtgtggttagctggttg 42
>37723_tca-mir-34:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 12 ggcagtgtggttagctggttg 32
>37724_tca-mir-34:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 12 ggcagtgtggttagctggttg 32
>38100_bma-mir-34:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 16 ggcagtgtggttagctggttg 36
|||||||||||||||||||||
Sbjct: 24 ggcagtgtggttagctggttg 44
