miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00685;mir-36;AAGD02001682.1/67036-66933 31234:Caenorhabditis
remanei
Length = 104
Score = 206 bits (104), Expect = 5e-53
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 2 ttgcacttgacgacgggaaccgtgctgatgttgacctcggtgataggactgaaccgttac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcacttgacgacgggaaccgtgctgatgttgacctcggtgataggactgaaccgttac 60
Query: 62 aagctatcaccgggtgaacattggtactggtcccttagtcatga 105
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagctatcaccgggtgaacattggtactggtcccttagtcatga 104
>RF00685;mir-36;AAGD02001682.1/67810-67706 31234:Caenorhabditis
remanei
Length = 105
Score = 117 bits (59), Expect = 3e-26
Identities = 92/103 (89%)
Strand = Plus / Plus
Query: 1 attgcacttgacgacgggaaccgtgctgatgttgacctcggtgataggactgaaccgtta 60
||||||||||||||||||||| ||||||||| ||||| ||| |||||||| ||| || |
Sbjct: 1 attgcacttgacgacgggaacagtgctgatgccgaccttggtaataggactaaactgtga 60
Query: 61 caagctatcaccgggtgaacattggtactggtcccttagtcat 103
||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 61 caagctatcaccgggtgggcattggttctggtcccttagtcat 103
>RF00685;mir-36;AAGD02001682.1/66179-66083 31234:Caenorhabditis
remanei
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 ctatcaccgggtgaacattggt 86
||||||||||||||||||||||
Sbjct: 57 ctatcaccgggtgaacattggt 78
