miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38301_cel-mir-63:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 74  actatgacactgaagcgagttagaaatggtgattct 109
           ||||||||||||||||||||| ||||| ||| ||||
Sbjct: 59  actatgacactgaagcgagttggaaatagtggttct 94



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 ttctaactcgtcggtagtcat 49
          |||||||||||||||||||||
Sbjct: 19 ttctaactcgtcggtagtcat 39




>38608_ppc-mir-63a:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 aactatgacactgaagcgag 92
          ||||||||||||||||||||
Sbjct: 68 aactatgacactgaagcgag 87