miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00833;mir-70;AAGD02012111.1/237549-237430 31234:Caenorhabditis
           remanei
          Length = 120

 Score =  198 bits (100), Expect = 9e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacgaggagaacagctataggaataccgttgatgcattacactaaacatttgaaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   atgaacgaggagaacagctataggaataccgttgatgcattacactaaacatttgaaaga 64

                                                   
Query: 61  tgtaatacgtcatttggtgttcctatagttacccgttcaa 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  tgtaatacgtcatttggtgttcctatagttacccgttcaa 104




>RF00833;mir-70;ABEG01011270.1/567-448 135651:Caenorhabditis
          brenneri
          Length = 120

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 58 agatgtaatacgtcatttggtgtt 81
          ||||||||||||||||||||||||
Sbjct: 60 agatgtaatacgtcatttggtgtt 83