miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38544_crm-mir-81:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 cggttttcacgttgatctgagagctaa 41
|||||||||| ||||||||||||||||
Sbjct: 17 cggttttcaccttgatctgagagctaa 43
>38091_bma-bantam:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 52 tctgagatcatagtgaaagctacttgcc 79
||||||||||| |||||||||| |||||
Sbjct: 52 tctgagatcattgtgaaagctatttgcc 79
>38192_cbr-mir-81:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 cggttttcacgttgatctgagagc 38
|||||||||| |||||||||||||
Sbjct: 14 cggttttcaccttgatctgagagc 37
>38319_cel-mir-81:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 tttctgagatcatagtgaaagcta 73
||||||||||||| ||||||||||
Sbjct: 63 tttctgagatcatcgtgaaagcta 86
>34994_dpu-bantam:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 tttctgagatcatagtgaaagct 72
||||||||||||| |||||||||
Sbjct: 57 tttctgagatcattgtgaaagct 79
>35040_api-bantam:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 ttctgagatcatagtgaaagcta 73
|||||||||||| ||||||||||
Sbjct: 45 ttctgagatcattgtgaaagcta 67
>35510_bmo-bantam:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 51 ttctgagatcatagtgaaagcta 73
|||||||||||| ||||||||||
Sbjct: 53 ttctgagatcattgtgaaagcta 75
