miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01899;mir-2241;ABKE01012904.1/313-215 54126:Pristionchus
pacificus
Length = 99
Score = 184 bits (93), Expect = 1e-46
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 gctactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gctactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatc 62
Query: 61 accgggattctcagtggattagggcatcgagtc 93
|||||||||||||||||||||||||||||||||
Sbjct: 63 accgggattctcagtggattagggcatcgagtc 95
>RF01899;mir-2241;ABKE01003450.1/5005-5103 54126:Pristionchus
pacificus
Length = 99
Score = 46.1 bits (23), Expect = 8e-05
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 29 aatccaggtttcgatcactaattggtgtgatcaccgggattct 71
||||| ||||| |||||||| ||| |||||||||||||||||
Sbjct: 31 aatcccggttttgatcactagttgcagtgatcaccgggattct 73
