miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38673_ppc-mir-2240c:mirbase
Length = 115
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 2 actcgcaacgtcccttatcttctgaaatctctgtttcgatcactaattggagtgatccca 61
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 14 actcgctacgtcccttatcttctgaaatctctgtttcgatcactaattggtgtgatccca 73
Query: 62 gggattctcagtagattagggcatcgagt 90
|||||||||||| ||||||||||||||||
Sbjct: 74 gggattctcagtggattagggcatcgagt 102
>38671_ppc-mir-2240a-2:mirbase
Length = 97
Score = 123 bits (62), Expect = 2e-29
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 1 tactcgcaacgtcccttatcttctgaaatctctgtttcgatcactaattggagtgatccc 60
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
Sbjct: 3 tactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatcac 62
Query: 61 agggattctcagtagattagggcatcgagt 90
|||||||||||| ||||||||||||||||
Sbjct: 63 cgggattctcagtggattagggcatcgagt 92
>38670_ppc-mir-2240a-1:mirbase
Length = 97
Score = 123 bits (62), Expect = 2e-29
Identities = 83/90 (92%)
Strand = Plus / Plus
Query: 1 tactcgcaacgtcccttatcttctgaaatctctgtttcgatcactaattggagtgatccc 60
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |
Sbjct: 3 tactcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatcac 62
Query: 61 agggattctcagtagattagggcatcgagt 90
|||||||||||| ||||||||||||||||
Sbjct: 63 cgggattctcagtggattagggcatcgagt 92
