miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38672_ppc-mir-2240b:mirbase
Length = 90
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Plus
Query: 14 actcgctacgtcccttatcttctgaaatctctgtttcgatcactaattggtgtgatccca 73
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 actcgcaacgtcccttatcttctgaaatctctgtttcgatcactaattggagtgatccca 61
Query: 74 gggattctcagtggattagggcatcgagt 102
|||||||||||| ||||||||||||||||
Sbjct: 62 gggattctcagtagattagggcatcgagt 90
>38670_ppc-mir-2240a-1:mirbase
Length = 97
Score = 139 bits (70), Expect = 5e-34
Identities = 88/94 (93%)
Strand = Plus / Plus
Query: 14 actcgctacgtcccttatcttctgaaatctctgtttcgatcactaattggtgtgatccca 73
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 4 actcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatcacc 63
Query: 74 gggattctcagtggattagggcatcgagtcagct 107
||||||||||||||||||||||||||||||||||
Sbjct: 64 gggattctcagtggattagggcatcgagtcagct 97
>38671_ppc-mir-2240a-2:mirbase
Length = 97
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 14 actcgctacgtcccttatcttctgaaatctctgtttcgatcactaattggtgtgatccca 73
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 4 actcgcaacgtcccttatcttctgaaatccaggtttcgatcactaattggtgtgatcacc 63
Query: 74 gggattctcagtggattagggcatcgagtc 103
||||||||||||||||||||||||||||||
Sbjct: 64 gggattctcagtggattagggcatcgagtc 93
