miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>24655_bfl-mir-29b:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
||||||||||||||||||||||||
Sbjct: 62 tagcaccatttgaaatcagtgctt 85
>25453_pma-mir-29c:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 55 tagcaccatttgaaatcagtg 75
>25728_xtr-mir-29b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>25912_gga-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>25913_gga-mir-29b-2:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>26419_tgu-mir-29b-1:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 41 tagcaccatttgaaatcagtg 61
>26420_tgu-mir-29b-2:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 41 tagcaccatttgaaatcagtg 61
>26649_cfa-mir-29b-1:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 43 tagcaccatttgaaatcagtg 63
>26650_cfa-mir-29b-2:mirbase
Length = 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 44 tagcaccatttgaaatcagtg 64
>26971_eca-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>26972_eca-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>27355_mdo-mir-29b:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 55 tagcaccatttgaaatcagtg 75
>27494_age-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>27554_lla-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>27602_sla-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>27677_mml-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>27678_mml-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>28190_mne-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>28276_ggo-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>28277_ggo-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>28388_hsa-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>28389_hsa-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>30063_ppa-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>30064_ppa-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>30173_ptr-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>30174_ptr-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>30778_ppy-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>30779_ppy-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>31448_oan-mir-29b-1:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 76 tagcaccatttgaaatcagtg 96
>31449_oan-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>31803_mmu-mir-29b-1:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 47 tagcaccatttgaaatcagtg 67
>31804_mmu-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>32684_rno-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>32685_rno-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>33086_rno-mir-3587:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 58 tagcaccatttgaaatcagtg 38
>33159_bta-mir-29b-1:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>33160_bta-mir-29b-2:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>33936_ssc-mir-29b:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 51 tagcaccatttgaaatcagtg 71
>34244_dre-mir-29b-1:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 52 tagcaccatttgaaatcagtg 72
>34245_dre-mir-29b-2:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 56 tagcaccatttgaaatcagtg 76
>34246_dre-mir-29b-3:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 55 tagcaccatttgaaatcagtg 75
>34571_fru-mir-29b-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 50 tagcaccatttgaaatcagtg 70
>34572_fru-mir-29b-2:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 45 tagcaccatttgaaatcagtg 65
>34718_tni-mir-29b-1:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 50 tagcaccatttgaaatcagtg 70
>34719_tni-mir-29b-2:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 49 tagcaccatttgaaatcagtg 69
>34868_sko-mir-29b:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtg 81
|||||||||||||||||||||
Sbjct: 61 tagcaccatttgaaatcagtg 81
>38855_lgi-mir-29:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 61 tagcaccatttgaaatcagt 80
>38735_cte-mir-29a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 61 tagcaccatttgaaatcagt 80
>25451_pma-mir-29a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 50 tagcaccatttgaaatcagt 69
>35355_ame-mir-29b:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 67 tagcaccatttgaaatcagt 86
>36128_dan-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>36206_der-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>36295_dgr-mir-285:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 66 tagcaccattcgaaatcagtgctt 89
>36434_dme-mir-285:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>36435_dme-mir-285:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>36803_dmo-mir-285:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 67 tagcaccattcgaaatcagtgctt 90
>36960_dps-mir-285:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 65 tagcaccattcgaaatcagtgctt 88
>37166_dse-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>37242_dsi-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>37380_dvi-mir-285:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 66 tagcaccattcgaaatcagtgctt 89
>37459_dwi-mir-285:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 61 tagcaccattcgaaatcagtgctt 84
>37535_dya-mir-285:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagtgctt 84
|||||||||| |||||||||||||
Sbjct: 64 tagcaccattcgaaatcagtgctt 87
>37574_ngi-mir-29b:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 61 tagcaccatttgaaatcagt 80
>37642_nvi-mir-29b:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 tagcaccatttgaaatcagt 80
||||||||||||||||||||
Sbjct: 66 tagcaccatttgaaatcagt 85
