miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>34982_isc-mir-279:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 58 tcatgactagatccacactcatccacagaagcgg 91
||||||||||||||||||||||||| ||||||||
Sbjct: 49 tcatgactagatccacactcatccatagaagcgg 82
>38773_cte-mir-279:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 gtcatgactagatccacactcatcca 82
||||||||||||||||||||||||||
Sbjct: 57 gtcatgactagatccacactcatcca 82
>35024_dpu-mir-279:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tcatgactagatccacactcatcca 82
|||||||||||||||||||||||||
Sbjct: 57 tcatgactagatccacactcatcca 81
>37773_tca-mir-279b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tcatgactagatccacactcatcca 82
|||||||||||||||||||||||||
Sbjct: 56 tcatgactagatccacactcatcca 80
>37774_tca-mir-279b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 58 tcatgactagatccacactcatcca 82
|||||||||||||||||||||||||
Sbjct: 56 tcatgactagatccacactcatcca 80
>35552_bmo-mir-279a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 59 catgactagatccacactcatcca 82
||||||||||||||||||||||||
Sbjct: 50 catgactagatccacactcatcca 73
>35079_api-mir-279a:mirbase
Length = 64
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 catgactagatccacactcatcc 81
|||||||||||||||||||||||
Sbjct: 42 catgactagatccacactcatcc 64
