miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00720;mir-317;AAZO01004205.1/873-973 121224:Pediculus humanus
          corporis (human body louse)
          Length = 101

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 64 gtgaacacagctggtggtatct 85




>RF00720;mir-317;ABLF01040770.1/5816-5924 7029:Acyrthosiphon pisum
          (pea aphid)
          Length = 109

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 72 gtgaacacagctggtggtatct 93




>RF00720;mir-317;AADK01000441.1/12625-12537 7091:Bombyx mori
          (domestic silkworm)
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 52 gtgaacacagctggtggtatct 73




>RF00720;mir-317;AADG05001988.1/60488-60578 7460:Apis mellifera
          (honey bee)
          Length = 91

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatct 75




>RF00720;mir-317;AAGE02012640.1/88438-88525 7159:Aedes aegypti
          (yellow fever mosquito)
          Length = 88

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 51 gtgaacacagctggtggtatct 72




>RF00720;mir-317;AAJJ01000475.1/38254-38168 7070:Tribolium
          castaneum (red flour beetle)
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 60 gtgaacacagctggtggtatct 81
          ||||||||||||||||||||||
Sbjct: 50 gtgaacacagctggtggtatct 71