miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00239;mir-124;AAWT01074852.1/5580-5657 79327:Schmidtea
mediterranea
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 7 tattctttactagcgctcacctcgtgacctttgtcagtgttggactaaggcacgcggtga 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tattctttactagcgctcacctcgtgacctttgtcagtgttggactaaggcacgcggtga 60
Query: 67 atgccagatgaaaggatg 84
||||||||||||||||||
Sbjct: 61 atgccagatgaaaggatg 78
>RF00239;mir-124;ABLA01036893.1/860-781 51029:Heterodera glycines
Length = 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gactaaggcacgcggtgaatgcca 72
||||||||||||||||||||||||
Sbjct: 46 gactaaggcacgcggtgaatgcca 69
>RF00239;mir-124;ABLE02011614.1/2350-2264 281687:Caenorhabditis
japonica
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 actaaggcacgcggtgaatgcca 72
|||||||||||||||||||||||
Sbjct: 54 actaaggcacgcggtgaatgcca 76
>RF00239;mir-124;Z72504.1/8327-8413 6239:Caenorhabditis elegans
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 actaaggcacgcggtgaatgcca 72
|||||||||||||||||||||||
Sbjct: 54 actaaggcacgcggtgaatgcca 76
>RF00239;mir-124;ABEG01011177.1/3244-3158 135651:Caenorhabditis
brenneri
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 actaaggcacgcggtgaatgcca 72
|||||||||||||||||||||||
Sbjct: 54 actaaggcacgcggtgaatgcca 76
>RF00239;mir-124;CAAC02000470.1/381134-381048 6238:Caenorhabditis
briggsae
Length = 87
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 actaaggcacgcggtgaatgcca 72
|||||||||||||||||||||||
Sbjct: 54 actaaggcacgcggtgaatgcca 76
>RF00239;mir-124;ABKE01011138.1/1481-1398 54126:Pristionchus
pacificus
Length = 84
Score = 46.1 bits (23), Expect = 7e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 actaaggcacgcggtgaatgcca 72
|||||||||||||||||||||||
Sbjct: 51 actaaggcacgcggtgaatgcca 73
