miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 129 bits (65), Expect = 1e-29
Identities = 96/105 (91%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattc 62
||||||| ||||||||||||||||||||||| |||||||| ||||||| ||| | |||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcata-tagattc 67
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 66 attaacatctatatgaatgtgggaaatgctagaatgacttacatt 22
Score = 81.8 bits (41), Expect = 2e-15
Identities = 93/107 (86%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt--tatagttgat 60
||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| || |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatg-t 62
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
| || | ||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 63 taatga--atctatatgaatgtgggaaatgctagaatgacttacatt 107
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 115 bits (58), Expect = 1e-25
Identities = 89/98 (90%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagtt-gattcattaaca 69
||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||| |
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacatttatatttagattcattaata 71
Query: 70 tcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| || || | |||||||||||||||||||||
Sbjct: 72 tcaatatgaatatgagaaatgctagaatgacttacatt 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcattt 88
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 111/129 (86%), Gaps = 7/129 (5%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gtt 57
||||||| ||||||||||||||||||||||| |||||||||||||||| ||| |||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 58 --gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacg 115
|||||||||||||||||||| ||||||| |||||||||||||||| ||| | |||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 116 aagtaagta 124
|| |||||
Sbjct: 124 gaggaagta 132
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 66 aacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| |||||| |||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 4e-23
Identities = 108/126 (85%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gttg 58
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
| ||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 65 actcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 124
Query: 119 taagta 124
|||||
Sbjct: 125 gaagta 130
Score = 83.8 bits (42), Expect = 5e-16
Identities = 87/102 (85%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata-----gttgattcatt 65
||||||||||||||||||||||| |||||||| ||||||| ||| ||| || ||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgttaatgagtt 64
Query: 66 aacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 63 aacatcgatatgaatgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 105 bits (53), Expect = 1e-22
Identities = 88/97 (90%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttgattcattaacat 70
||||||||||||||||||||||| |||||||||||| ||| || | |||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccatatt-atc-tagattcattaacat 69
Query: 71 caatatggatgtggggaatgctagaatgacttacatt 107
||||||| |||| || |||||||||||||||||||||
Sbjct: 70 caatatgaatgtaggaaatgctagaatgacttacatt 106
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattt 42
||||||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcattt 85
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||||||||||| | ||||| || |||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 9e-21
Identities = 105/122 (86%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttg-attc 62
|||||| ||||||||||||||||||||||| |||||||| |||| || ||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatatatatattc 64
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
||||| ||||||||| |||| || ||||||||||||||||||||| | ||||| || |||
Sbjct: 65 attaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaag 124
Query: 123 ta 124
||
Sbjct: 125 ta 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 91/108 (84%), Gaps = 3/108 (2%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttg--a 59
|||||| | ||||||||||||||||||||||| |||||||| | ||||| ||| ||| |
Sbjct: 128 actacttcctccgtttcacaatgtaagtcattctagcatttccaacattcata-ttgata 70
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|| || || || ||||| | ||||| |||||||||||||||||||||
Sbjct: 69 ttaatgaatatatatatgaacgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 9e-21
Identities = 90/103 (87%), Gaps = 9/103 (8%)
Strand = Plus / Plus
Query: 14 gtttcacaatgtaagtcattatagcattttccacatttata-----gtt----gattcat 64
|||||||||| |||||||||||||||||||||||||| ||| ||| |||||||
Sbjct: 11 gtttcacaatataagtcattatagcattttccacattcatattgatgttaatagattcat 70
Query: 65 taacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 taacatcaatatgaatgtgggaaatgctagaatgacttacatt 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| || |||||||||||||||||||| |||||||| |||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacatt 84
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 99.6 bits (50), Expect = 9e-21
Identities = 109/130 (83%), Gaps = 9/130 (6%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagt------- 56
|||||| ||||||||||||||||||||||| | |||||||||||||| ||| |
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgtat 64
Query: 57 --tgattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaac 114
||||||||||||||||||||| ||||||| ||||||| ||||||||||||| | ||||
Sbjct: 65 cttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 124
Query: 115 gaagtaagta 124
| || |||||
Sbjct: 125 ggaggaagta 134
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 127 tccgtttcacaatgtaagtcattttagcatttcccacatt 88
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 95.6 bits (48), Expect = 1e-19
Identities = 108/128 (84%), Gaps = 5/128 (3%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttg----- 58
|||||| ||||||||||||||||||||||| |||||||||||| ||| ||| |
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatatatatat 71
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||| ||||||| ||||| | ||||||||||||||||||||| | ||||| ||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 119 taagtact 126
|||||||
Sbjct: 10 gaagtact 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 93.7 bits (47), Expect = 5e-19
Identities = 94/108 (87%), Gaps = 5/108 (4%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgat--- 60
|||||| ||||||||||||||||| | ||| |||||||||||||||| ||| |||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcata-ttgatgtt 70
Query: 61 -tcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||| |||||| ||||||| |||||||||||||
Sbjct: 69 atcattaacatcaatatgaatgtggaaaatgctaaaatgacttacatt 22
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacatt 51
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 91.7 bits (46), Expect = 2e-18
Identities = 105/122 (86%), Gaps = 2/122 (1%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattc 62
||||||| || |||||||||||||||||||| ||||| || ||||||| ||| ||||| |
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcata-ttgat-c 67
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
||||||||||||||| |||||| | ||||| ||||||||||||| | ||||| || |||
Sbjct: 66 attaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaag 7
Query: 123 ta 124
||
Sbjct: 6 ta 5
Score = 69.9 bits (35), Expect = 8e-12
Identities = 85/98 (86%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttgattcattaa-ca 69
||||||||| ||||||||||||| ||||| |||||||||| ||| ||||| |||| |
Sbjct: 12 tccgtttcataatgtaagtcattttagcactttccacattcata-ttgat--gttaatga 68
Query: 70 tcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| ||||||| | |||||||||||||||||||
Sbjct: 69 tcaatatgaatgtgggaagtgctagaatgacttacatt 106
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 89.7 bits (45), Expect = 8e-18
Identities = 100/118 (84%), Gaps = 4/118 (3%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagt----tgattcatta 66
||||||||| ||||||||||||| |||||||||||| ||| ||| | | ||||||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcattttccatattcatattgatgtaattcatta 63
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||| || ||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 62 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 94/112 (83%), Gaps = 6/112 (5%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgat 60
||||||| | ||||||||||||||||||||||| |||||||||||| ||| ||| |||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcattttccatattcata-ttgat 60
Query: 61 -----tcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
| | | ||||||||||| || ||| |||||||||||||||||||||
Sbjct: 61 gttaatgaattacatcaatatgaatatggaaaatgctagaatgacttacatt 112
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 57 tgattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacga 116
||||||||||||||||||||| ||||||| ||||||||||||||||||||| | |||||
Sbjct: 72 tgattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 117 agtaagta 124
|| |||||
Sbjct: 12 aggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 56 ttgattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||||| ||||| | ||||||||||||| |||||||
Sbjct: 73 ttgattcattaacatcaatatgaatgtgagaaatgctagaatgaattacatt 124
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 3e-17
Identities = 110/132 (83%), Gaps = 10/132 (7%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gtt 57
||||||| ||||||||| ||||||||||||| |||||||| ||||||| ||| |||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
Query: 58 g-----attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaa 112
| ||||||| ||||||||||| ||||||| ||||||||||||||||||||| | ||
Sbjct: 76 gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaa 17
Query: 113 acgaagtaagta 124
||| || |||||
Sbjct: 16 acggaggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 66 aacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacatt 118
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagt 29
|||||| |||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 87.7 bits (44), Expect = 3e-17
Identities = 81/93 (87%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttgattcattaacat 70
||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacattcata----tttcattaacat 67
Query: 71 caatatggatgtggggaatgctagaatgactta 103
|| ||| ||||||| |||||||||||||||||
Sbjct: 68 cagtataaatgtgggaaatgctagaatgactta 100
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttata 71
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 3e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 69.9 bits (35), Expect = 8e-12
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacat 49
||||||||||||||||||||||| |||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacat 50
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| ||||||| ||||||| ||| |||||||||||||||||
Sbjct: 92 gattcattaacaacaatatgaatgtgggaaatactagaatgacttacatt 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacatt 112
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 91 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 140
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 111
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacatt 51
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 141
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacatt 112
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttata 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacatt 90
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||| |||||||| |||||| |||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtggaaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 85.7 bits (43), Expect = 1e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttata 96
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatgctagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||| ||||||||||||||||||||||||| ||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| |||||||| || ||| ||||||| |||||||||||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctataatgacttacatt 129
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 83 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 132
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| | ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 85.7 bits (43), Expect = 1e-16
Identities = 100/121 (82%), Gaps = 11/121 (9%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt-----------ca 53
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagt 123
|||||||||||||| |||| || ||||||||||||||||||||| | ||||| || ||||
Sbjct: 54 ttaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaagt 113
Query: 124 a 124
|
Sbjct: 114 a 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 107 tccgtttcacaatgtaagtcattctagcattt 76
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 79 atgtggggaatgctagaatgacttacatt 107
||||||| |||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 1e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 92 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 151
Query: 118 gtaagta 124
| |||||
Sbjct: 152 ggaagta 158
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttcca 46
|||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttcca 47
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatggaaaatgctagaatgacttacatt 22
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| | ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 161 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 112
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 1e-16
Identities = 106/127 (83%), Gaps = 5/127 (3%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagtt----- 57
||||||| ||| ||||| ||||||||||||| |||||||| |||||| ||| ||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatttgtcta 72
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||| | ||| ||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 72 aatatggatgtggggaatgctagaatgacttacatt 107
|||||| ||||| | |||||||||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacatt 113
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 83.8 bits (42), Expect = 5e-16
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattc 62
||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| ||||| |
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcata-ttgatac 68
Query: 63 atta-acatcaatatggatgtggggaatgctagaatgacttacatt 107
|| | ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 67 atcatgtatcaatatgaatgtggaaaatgctagaataacttacatt 22
Score = 81.8 bits (41), Expect = 2e-15
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||||||||| ||| |||||||||||||||| ||| ||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcata-ttgataca 63
Query: 64 tta-acatcaatatggatgtggggaatgctagaatgacttacatt 107
| | ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 64 tgatgtatcaatatgaatgtggaaaatgctagaataacttacatt 108
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcatttt 43
||||||||||||||||||||||| |||||||||
Sbjct: 133 tccgtttcacaatgtaagtcattctagcatttt 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||||||||||||||| | ||||| || ||||||
Sbjct: 103 aatgctagaatgacttacattgtgaaacggaggaagtac 141
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 83.8 bits (42), Expect = 5e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 142 tactactccctccgtttcacaatgtaagtcattctagcattttccacaattata 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||| ||||||||||||||||||| ||||||||| |||| |||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattata 55
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 73 gatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 83.8 bits (42), Expect = 5e-16
Identities = 91/105 (86%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||||||||| ||| |||||||||||||||| ||| ||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcata-ttgataca 63
Query: 64 tta-acatcaatatggatgtggggaatgctagaatgacttacatt 107
| | ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 64 tgatgtatcaatatgaatgtggnaaatgctagaataacttacatt 108
Score = 77.8 bits (39), Expect = 3e-14
Identities = 91/106 (85%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattc 62
||||||| ||||||||||||||||||| ||| |||||||| ||||||| ||| ||||| |
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcata-ttgatac 68
Query: 63 atta-acatcaatatggatgtggggaatgctagaatgacttacatt 107
|| | ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 67 atcatgtatcaatatgaatgtggaaaatgctagaataacttacatt 22
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||||||||| | ||||| ||||||||||||||||| ||| | ||||| |
Sbjct: 90 gattcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacgga 149
Query: 118 gtaagta 124
| |||||
Sbjct: 150 ggaagta 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||| ||||||||| |||||||| |||| ||||||
Sbjct: 149 tccgtttcacaatataagtcattctagcatttcccacgtttata 106
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||| ||||||| ||| |||||||||||||||| | ||||| ||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 119 taagta 124
|||||
Sbjct: 153 gaagta 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| || |||| |||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctaatatttcccacatt 112
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 5e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 90 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatgtagaaaatgctagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||| |||||||||||||||| |||||||| |||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacatt 110
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||| |||||||||| |||||
Sbjct: 12 tccgttccacaatgtaagtcattctagcattttctacatt 51
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 83.8 bits (42), Expect = 5e-16
Identities = 105/126 (83%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gttg 58
|||||| ||||||||||||||||||||||| | | |||||||||||| ||| || |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgtag 64
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||| |||||| ||| ||| ||||||||| ||| | ||||| ||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 119 taagta 124
|||||
Sbjct: 125 gaagta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| ||| ||||||||||||
Sbjct: 123 tccgtttcacaatataagtcattttagtattttccacatt 84
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 83 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 131
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatttata 55
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||||||||||||||||| |||||||| |||||||
Sbjct: 140 ccgtttcacaatgtaagtcattctagcatttcccacatt 102
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 79.8 bits (40), Expect = 8e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 63.9 bits (32), Expect = 5e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttcca 46
||||||||||||||||||||||| ||||||||||||
Sbjct: 145 tccgtttcacaatgtaagtcattctagcattttcca 110
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||| ||||| |||||| |||||||||||||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 54.0 bits (27), Expect = 5e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||||| || ||| ||||||||||||||||||||| | ||||| || ||||||
Sbjct: 95 acatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagtac 153
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 79.8 bits (40), Expect = 8e-15
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 82 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 129
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacatt 51
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| || |||||||||||||||||||| |||||||| |||||||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacatt 100
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||| |||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| ||||||||| ||| |||| |||||||
Sbjct: 161 tactactccctccgtttcacaatctaagtcattttagaatttcccacatt 112
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 8e-15
Identities = 98/120 (81%), Gaps = 13/120 (10%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttat------- 53
||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 54 ------agttgattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
| | ||||||||| |||||||||| ||||||| |||||||||||||||||||||
Sbjct: 62 ctaatgaatcgattcattagcatcaatatgaatgtgggaaatgctagaatgacttacatt 121
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 8e-15
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 55
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| |||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacaccaatataaatgtgggaaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgaaaaatgctagaatgactta 137
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 79.8 bits (40), Expect = 8e-15
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttatagt 56
||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 165 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagt 110
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct: 96 gattcattaacatcactatgaatgtgggaaatgctagaatgacttacatt 145
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||||||||||||||| | ||||| || ||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 79.8 bits (40), Expect = 8e-15
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||| |||||||||| |||| || |||||||||||||||||
Sbjct: 86 gattcattagcatcaatatgaatgtaggaaatgctagaatgactta 131
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattt 42
||||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 155 tactactccctccgtttcacaatataagtcattctagcattt 114
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 77.8 bits (39), Expect = 3e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaa 121
|||||||||||||||| ||||||| ||||||||||||||||||||| | ||||| || ||
Sbjct: 67 cattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaa 126
Query: 122 gta 124
|||
Sbjct: 127 gta 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 122 tccgtttcataatgtaagtcattctagcatttcccacatt 83
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagt 29
|||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttac 104
||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttac 117
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 85 ttcattaacatcaatatgaatgtgagaaatgctagaatgacttacatt 132
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattttccacatt 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| || |||||||||||||||||||| ||||||||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcattt 111
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttcca 46
||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgcaagtcattctagcattttcca 47
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttc 44
|||||| ||||||||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttc 45
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||| ||||| |||||| |||||||||||||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacatt 141
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttata 96
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatgctagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||| ||||||||||||||||||||||||| ||||||||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| |||||||| || ||| |||||||||||||||||||||
Sbjct: 80 gattcattaatatcaatataaatatggaaaatgctagaatgacttacatt 129
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 84 cattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 129
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 67 cattaacatcaatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||| |||||||| |||||||
Sbjct: 139 tccgttccacaatgtaagtcattctagcatttcccacatt 100
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttata 102
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacattta 52
||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttctcacattta 53
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
|||||||| ||||||| | ||||| | ||||||| ||||||||||||| | ||||| ||
Sbjct: 70 attcattagcatcaatgtaaatgtgagaaatgctaaaatgacttacattgtgaaacggag 11
Query: 119 taagtac 125
||||||
Sbjct: 10 gaagtac 4
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| | ||||| ||||||| |||| ||||||||||||||||
Sbjct: 71 gattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 22
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| | ||||| |||||| |||||||||||||||||||||
Sbjct: 92 gattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||| || ||||||||||||| || ||||| |||||||
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacatt 51
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 77.8 bits (39), Expect = 3e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 92 gattcattaacatcaatatgaatgtggaaaatgctagaatgacttacatt 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||| ||||| |||||| |||||||||||||| |||||| | ||||| |
Sbjct: 71 gattcattagcatctatatgaatgtggacaatgctagaatgacatacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtatgtcattctagcattgtccacatt 51
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 55
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||| |||||||| ||||||| |||||||||||||||||||||
Sbjct: 66 attaatatcaatataaatgtgggaaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 129 tccgtttcacaatataagtcattctagcatttcccacatt 90
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||| ||||||||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 49 gattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 108
Query: 118 gtaagta 124
| |||||
Sbjct: 109 ggaagta 115
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 108 tccgtttcataatgtaagtcattctagcatttcccacatt 69
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 77.8 bits (39), Expect = 3e-14
Identities = 87/103 (84%), Gaps = 10/103 (9%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata-----gtt-----gat 60
||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||
Sbjct: 12 tccgtttcacaatataagtcattctagcattttccacattcatattgatgttatctagat 71
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||||||||||| ||||||| |||| ||||||||||||
Sbjct: 72 tcattaacatcaatatgaatgtgggaaatgttagaatgactta 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 65 taacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||| |||||| ||||||||||||||||| ||| | ||||| || |||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| || ||||| |||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacatt 89
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| || |||| ||||||||||||||||||||| | ||||| |
Sbjct: 74 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaacgga 133
Query: 118 gtaagta 124
| |||||
Sbjct: 134 ggaagta 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 55
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttata 99
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 12 ccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttata 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 79 atgtggggaatgctagaatgacttacatt 107
||||||| |||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacatt 22
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 atgtggggaatgctagaatgacttacatt 107
||||||| |||||||||||||||||||||
Sbjct: 61 atgtgggaaatgctagaatgacttacatt 89
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 atgtggggaatgctagaatgacttacatt 107
||||||| |||||||||||||||||||||
Sbjct: 104 atgtgggaaatgctagaatgacttacatt 132
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 73 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacatt 122
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattt 101
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||| ||||||||||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 82 tggggaatgctagaatgacttacattttaaaacgaagtaagta 124
|||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 47 tgggaaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| ||||||| |||||||||||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatt 141
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||||||||| ||||||| ||||| | ||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| | |||||| |||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatttttgcatttcccacatttata 55
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacatt 112
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/100 (84%), Gaps = 7/100 (7%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata-------gttgattca 63
||||||||||||||||||||||| |||||||| ||||||| ||| | ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatctagattca 71
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgactta 103
||| ||| |||||| ||||||| |||||||||||||||||
Sbjct: 72 ttagcattaatatgaatgtgggaaatgctagaatgactta 111
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 69 atcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||| ||||||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacatt 86
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 119 taagta 124
|||||
Sbjct: 10 gaagta 5
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || |||| |||||||||||||||||||||
Sbjct: 92 gattcattaacatctatatgaatatgggtaatgctagaatgacttacatt 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcatt 121
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcatt 41
||||||||| ||||||||||||| |||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 104/126 (82%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gttg 58
|||||| ||||||| ||||||||||||||| ||| |||| ||||||||||| | |
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatatctatctag 64
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||| | ||| ||||||| ||||||||||||| | ||||| ||
Sbjct: 65 attcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaacggag 124
Query: 119 taagta 124
|||||
Sbjct: 125 gaagta 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcatttt 43
||||||||||||||||||||||| |||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattttagcatttt 91
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacaacaatatgaatgtgggaaatgctagaatgacttacatt 22
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| ||||||| |||| | ||||||||||||||
Sbjct: 92 gattcattaccatcaatatgaatgtgggaaatggtggaatgacttacatt 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||| ||||||||||||| | ||||| |||||||
Sbjct: 161 tactactccttccgtttcataatgtaagtcattccaccatttcccacatt 112
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgttagaatgacttacatt 22
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttc 44
||||||||||||||||||||||| ||||||||||
Sbjct: 136 tccgtttcacaatgtaagtcattctagcattttc 103
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| || ||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacatttcccacatt 51
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || |||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgctagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||| ||||||||||||| ||||||||
Sbjct: 132 tccgtttcataatgtaagtcattctagcattt 101
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 82 tggggaatgctagaatgacttacattttaaaacgaagtaagta 124
|||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 97 tgggaaatgctagaatgacttacattatgaaacggaggaagta 139
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 84/100 (84%), Gaps = 7/100 (7%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata-------gttgattca 63
||||||||||||||||||||||| |||||||| ||||||| ||| | ||||||
Sbjct: 125 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatctagattca 66
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgactta 103
||| ||| |||||| ||||||| |||||||||||||||||
Sbjct: 65 ttagcattaatatgaatgtgggaaatgctagaatgactta 26
Score = 63.9 bits (32), Expect = 5e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 69 atcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||| ||||||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 86 gattcattgacatcaatatgaatgtgggaaatgctagaatgacttacatt 135
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||| ||||||||||| ||||||| |||| |||||||||||||||| | ||||| |
Sbjct: 71 gattcattgacatcaatatgaatgtgggaaatgatagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacatt 106
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| || ||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctatcatttcccacatt 51
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 1e-13
Identities = 96/113 (84%), Gaps = 8/113 (7%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gt 56
|||||| | ||||||||||||||||||||||| |||||||||||| ||| ||| ||
Sbjct: 133 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 74
Query: 57 t--gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
| |||||| ||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 73 ttagattca-taacatcaatatgaatgtggaaaatgctagaataacttacatt 22
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacatt 51
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttatagt 56
||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagt 57
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct: 71 gattcattaacatcactatgaatgtgggaaatgctagaatgacttacatt 22
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacatt 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| |||||| |||| ||||||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtggaaaatgttagaatgacttacatt 141
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattatagcattacccacatt 51
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggtaatgctataatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| |||||| ||||||| ||||||| ||||||||| ||| | ||||| |
Sbjct: 92 gattcattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacgga 151
Query: 118 gtaagta 124
| |||||
Sbjct: 152 ggaagta 158
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 151 tccgtttcacaatataagtcattttagcatttcccacatt 112
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 1e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 74 gattcattaacatcaatatgaatgtgggaaatgctagaatgactta 119
Score = 69.9 bits (35), Expect = 8e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
|||||||| |||||| ||||||| ||||||||||||||||||||| | ||||| || |||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 123 tac 125
|||
Sbjct: 6 tac 4
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacatt 94
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 70 gattcattaacatcaatatgaatgtgggaaatgttagaatgacttacatt 119
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| || ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacatt 90
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 69 atcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||| || |||| ||||||||||||||||||||| | ||||| || ||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| |||||| |||||| ||||||||||||||||||||||
Sbjct: 92 gattcattaacattaatatgaatgtggagaatgctagaatgacttacatt 141
Score = 73.8 bits (37), Expect = 5e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||| ||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacatt 112
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||| |||||| ||||||| ||||||| ||||||||||||| | ||||| |
Sbjct: 71 gattcattaacactaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacatt 51
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 1e-13
Identities = 104/126 (82%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata-----gttg 58
|||||| ||||||||||||| ||||||||| |||||||| ||||||| ||| | |
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatatctatctag 64
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||| ||||| |||| ||||||| |||||||| | ||||| ||
Sbjct: 65 attcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaacggag 124
Query: 119 taagta 124
|||||
Sbjct: 125 gaagta 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 73 atatggatgtggggaatgctagaatgactta 103
||||| ||||||| |||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgactta 26
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||||| |||||||||| |||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Query: 118 gtaagtact 126
| |||||||
Sbjct: 11 ggaagtact 3
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||||| |||||||||| |||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaacgga 12
Query: 118 gtaagtact 126
| |||||||
Sbjct: 11 ggaagtact 3
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 73.8 bits (37), Expect = 5e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagt 119
|||||||||||||||||| ||||||| |||||||||||||||| |||| | ||||| ||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 120 aagta 124
|||||
Sbjct: 9 aagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| | |||||||||||||| |||||||| |||||||| |||||||
Sbjct: 3 actacttcctccgtttcacaatgcaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 45 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 73.8 bits (37), Expect = 5e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 66 gattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 73.8 bits (37), Expect = 5e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| ||||| | ||||||||||||||||| ||| | ||||| |
Sbjct: 61 gattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 120
Query: 118 gtaagtact 126
| |||||||
Sbjct: 121 ggaagtact 129
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagtact 126
||||||||||||||||||||| | ||||| || |||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 120 tccgtttcacaatataagtcattctagcattt 89
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||| ||||| ||||||||||||| ||| ||||| ||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacatt 70
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 101 tccgtttcacaatgtaagtcattctagcattttccacaattata 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||||||||||| | ||||| || |||||
Sbjct: 71 aatgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 63.9 bits (32), Expect = 5e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagta 120
||||||||||||||| | |||||| ||||||||||||||||||||| | ||||| || |
Sbjct: 68 tcattaacatcaatacgaatgtggaaaatgctagaatgacttacattgtgaaacggagga 9
Query: 121 agta 124
||||
Sbjct: 8 agta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttc 44
|||||||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttc 118
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||| |||||||||| || | | |||||||||||||||||
Sbjct: 92 gattcattagcatcaatatgaatatagaaaatgctagaatgactta 137
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| || |||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| |||||| ||||| | |||||||||||||||||||||
Sbjct: 92 gattcattaacattaatatgaatgtgagaaatgctagaatgacttacatt 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattt 120
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcatt 41
||||||||||||||||||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatt 42
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa
Japonica Group
Length = 156
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttccacatt 51
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||||||||||| |||| |||||||||||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacatt 106
Score = 63.9 bits (32), Expect = 5e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtact 126
||||||||||| |||||| ||||||||||||||||||||| | ||||| || |||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtact 3
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 89 tcattaacatcaatatgaatgtggaaaaggctagaatgacttacatt 135
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 71.9 bits (36), Expect = 2e-12
Identities = 106/131 (80%), Gaps = 10/131 (7%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagtt------ 57
|||||| ||| ||||||||||||||||||| |||||||| ||||||| ||| |
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatattatatatg 64
Query: 58 ----gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaa 113
|||||||||| || |||||| ||||||| ||||||||||||||||||||| | |||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 114 cgaagtaagta 124
|| || |||||
Sbjct: 125 cggaggaagta 135
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 128 tccgtttcacaatgtaagtcattctagcatttcccacatt 89
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 72 aatatggatgtggggaatgctagaatgacttacatt 107
|||||| ||||||| |||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 69.9 bits (35), Expect = 8e-12
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttcca 46
|||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttcca 103
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 79 gattcattaacatcaatatgaatatggaaaatgctagaatgacttacatt 128
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 71 gatttattaacatcaatataaatgtgagaaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||| ||||||||||||| |||||||| ||||||||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttctcacatttata 55
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacatt 93
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| ||||||||| || || | ||||||| ||||||||||||| | ||||| |
Sbjct: 71 gattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||| ||||| |||||||||| |||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttata 96
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| ||||| ||||||||||| |||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgaaaaatgctagaataacttacatt 22
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 8e-12
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
|||||||| |||||| ||||||| ||||||||||||||||||||| | ||||| || |||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 123 tac 125
|||
Sbjct: 6 tac 4
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacatt 94
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 74 gattcattaacatcaatatgaatgtggaaaatgctagaatgactta 119
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacatt 110
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
|||||||||||| | |||| ||||||| ||||| ||||||||||| ||| | ||||| ||
Sbjct: 70 attcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtgaaacggag 11
Query: 119 taagta 124
|||||
Sbjct: 10 gaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| | |||| ||||| |||||||||||||||||||||
Sbjct: 90 gattcattaacatgagtatgaatgtgaaaaatgctagaatgacttacatt 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| | |||||| |||||||
Sbjct: 12 tccgtttcacaatataagtcattctggcatttcccacatt 51
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| |||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttata 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 106 actacttcttccgtttcacaatataagtcattctagcatt 67
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 gtggggaatgctagaatgacttacatt 107
||||| |||||||||||||||||||||
Sbjct: 48 gtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||||||||| ||||||| ||||||| ||||||||||||| | ||||| |
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacatt 51
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcat-tatagcattttccacatt 50
|||||||| |||||||||||||||||||||| | |||||||| |||||||
Sbjct: 145 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacatt 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 62 cattaacatcaatatggatgtggggaatgctaga-atgacttacatt 107
||||| |||||||||| ||||||| ||||||| | ||||||||||||
Sbjct: 80 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacatt 126
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattata 55
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcat 32
||||||||| ||||||||||||||||||||||
Sbjct: 129 tactactccctccgtttcacaatgtaagtcat 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 71 gattcattaacatcaatataattgtggaaaatgctagaataacttacatt 22
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccac 47
||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccac 48
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 68 catcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| | ||||| |||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacatt 22
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 80 tgtggggaatgctagaatgacttacattttaaaacg 115
|||||| ||||||||||||| ||||||| |||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacg 98
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||| ||||| |||||| |||||||||||||||||||||
Sbjct: 71 gattcattggcatcgatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct: 92 gattcattagcatcaatatggatgtgaacaatagtagaatgacttacatt 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcatt 33
|||||| ||||||||| |||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcatt 129
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 69.9 bits (35), Expect = 8e-12
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
|||||||||||||||||||||||| | ||||||||||||||||||||| | ||||| ||
Sbjct: 69 attcattaacatcaatatggatgt-gaaaatgctagaatgacttacattgtgaaacggag 11
Query: 119 taagtac 125
||||||
Sbjct: 10 gaagtac 4
Score = 60.0 bits (30), Expect = 7e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttc 44
||||||||||||||||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattttc 45
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 69.9 bits (35), Expect = 8e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 66 aacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
|||||||||||| ||||||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 86 aacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 144
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||| |||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 70 attcatgaacatcaatatgaatgtgggaaatgctagaatggcttacatt 22
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 137 tccgtttcacaatgtaagtcattctagcatttcccacatt 98
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||||| |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacatt 51
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||||||||| ||||||| ||||||| ||||||||||||| | ||||| |
Sbjct: 77 gattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 136
Query: 118 gtaagta 124
| |||||
Sbjct: 137 ggaagta 143
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 136 tccgtttcacaatgtaagtcattttagcatttcccacatt 97
Score = 60.0 bits (30), Expect = 7e-09
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcat-tatagcattttccacatt 50
|||||||| |||||||||||||||||||||| | |||||||| |||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacatt 52
Score = 46.1 bits (23), Expect = 1e-04
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 62 cattaacatcaatatggatgtggggaatgctaga-atgacttacatt 107
||||| |||||||||| ||||||| ||||||| | ||||||||||||
Sbjct: 68 cattagcatcaatatgaatgtgggaaatgctaaacatgacttacatt 22
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||| ||||| |||||| |||||||||||||||||||||
Sbjct: 71 gattcattggcatcgatatgaatgtggaaaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||| ||||||||||| ||| |||||||||||||||||
Sbjct: 92 gattcattagcatcgatatggatgtgaaaaatactagaatgacttacatt 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacat 49
|||||| ||||||||| ||||||||||||| ||| ||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacat 113
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 112
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||| |||||| ||||| ||||||| |||||||||||||||||||||
Sbjct: 92 gattcatcaacatctatatgaatgtgggaaatgctagaatgacttacatt 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttaca 105
|||||||||||||| ||||| ||||| | |||| || |||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgagaaatgataaaatgacttaca 24
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||| ||||||||||| || |||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcattt 43
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 8e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| || | || ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| |||||| |||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcatt 112
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgcggaatatgctagaatgacttacatt 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| |||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttata 55
Score = 60.0 bits (30), Expect = 7e-09
Identities = 85/104 (81%), Gaps = 7/104 (6%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata-------gttgattca 63
|||||||||||||||||| |||| |||||||| ||||||| ||| | ||||||
Sbjct: 125 tccgtttcacaatgtaagacattctagcatttcccacattcatattgatgtctagattca 66
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||| ||||||||| || |||| ||||||| |||||||||||||
Sbjct: 65 ttagcatcaatataaatatgggaaatgctataatgacttacatt 22
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa
Indica Group
Length = 143
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttat 53
||||||| ||||||||| ||||||||||||| ||||||||| |||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttat 54
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||||||||| |||||| |||| |||||||||||| ||| | ||||| |
Sbjct: 73 gattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaacgga 132
Query: 118 gtaagta 124
| |||||
Sbjct: 133 ggaagta 139
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||| ||||||||| || |||||||||||||
Sbjct: 132 tccgtttcataatataagtcattctaacattttccacatt 93
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacat 49
|||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 78 gatgtggggaatgctagaatgacttacatt 107
|||||||| |||||||||||||||||||||
Sbjct: 51 gatgtgggaaatgctagaatgacttacatt 22
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| ||||||||||||||||| ||||| |||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 67.9 bits (34), Expect = 3e-11
Identities = 101/121 (83%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttata-ttgat--g 61
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagt 123
||||||||||||| || || | ||||||| ||||||||| ||| | ||||| || ||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 124 a 124
|
Sbjct: 122 a 122
Score = 60.0 bits (30), Expect = 7e-09
Identities = 82/97 (84%), Gaps = 3/97 (3%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttgattcattaacat 70
||||||||||||| ||||||||| |||||||| || ||||||| ||||| |||||||
Sbjct: 115 tccgtttcacaatataagtcattttagcatttctcatatttata-ttgat--gttaacat 59
Query: 71 caatatggatgtggggaatgctagaatgacttacatt 107
|||||| || || | ||||||| |||||||||||||
Sbjct: 58 caatataaatatgagaaatgctaaaatgacttacatt 22
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || |||| |||||| ||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgggaaatgcttgaatgacttacatt 22
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/52 (92%), Gaps = 2/52 (3%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttata 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| ||||||||||||||||||||||| |||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 92 gatttattaacatcaatataaatgtga--aatgctagaatgacttacatt 139
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 92 gattcattaatatcaatatgaatgtgggaaatgctagaatgactta 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacatt 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| | ||||||||||||| ||||||||| || | |||||||||||
Sbjct: 2 tactacttcctccgtttcacaatataagtcattctaactttttccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| |||||| |||||| || | |||||||||||| ||| | ||||| |
Sbjct: 71 gattcattaacattaatatgaatgtggaaaaagttagaatgacttatattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||| | |||||||||||||||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgtgcaatgctagaatgacttacatt 115
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 71 gattcattaatatcaatatgaatgtgggaaatgatagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| || ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacatt 51
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattt 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 73 atatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||| ||||| | ||||||||||||||||||||| | ||||| || |||||
Sbjct: 107 atatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||||||||| | ||||||| |||||||||||||
Sbjct: 92 gattcattagcatcaatatggatgtgagaaatgctaaaatgacttacatt 141
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttcccacatt 51
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcattt 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||| || | |||| ||||||| ||||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||| ||||||||| ||||||||||||| |||||||| |||||| ||||
Sbjct: 131 tactactccctccgtttcataatgtaagtcattctagcatttcccacatctata 78
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 73 atatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||| |||||||||||||||||||||
Sbjct: 77 atatagatgtgggaaatgctagaatgacttacatt 111
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||| || |||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||| ||||||||||||| || ||||| |||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 80 gattcattaacatcaatatgaatatagtaaatgctagaatgactta 125
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| | ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattttagcatttcccacatt 51
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 56 ttgattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacg 115
|||||||||||||||| | ||| ||||||| ||||||| ||||||||||||| | |||||
Sbjct: 73 ttgattcattaacatctacatgaatgtgggaaatgctaaaatgacttacattgtgaaacg 14
Query: 116 aagtaagta 124
|| |||||
Sbjct: 13 gaggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||| ||||||| |||||||| ||||
Sbjct: 90 gattcattaacatctatatgaatgtgaaaaatgctaaaatgacttgcatt 139
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| |||| || |||||||||||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgttggtaatgctagaatgacttacatt 22
Score = 67.9 bits (34), Expect = 3e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||| |||| ||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 119 taagta 124
|||||
Sbjct: 153 gaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| ||||||||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||| ||||||||||||| ||||||| |||||| ||||
Sbjct: 151 tccgtttcataatgtaagtcattctagcattgcccacatatata 108
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| ||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 92 gattcattgacatcaatatgaatgtgagaaatgctagaatgacttacatt 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 151 tccgtttcacaatgtaagtcattctagcattt 120
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcat 40
||||||||||||||||||||||| ||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcat 41
Score = 46.1 bits (23), Expect = 1e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 70 tcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| ||||| | ||||||||||||||||||||
Sbjct: 59 tcaatatgaatgtgaganatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||||| ||||||||||||| |||||||
Sbjct: 66 gattcattaacatctatatgcatgtgggcaatgctagaatgatttacatt 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 73 atatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||| || |||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 3e-11
Identities = 78/93 (83%), Gaps = 6/93 (6%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttgattcattaacat 70
||||||||||||| ||||||||| |||||||| ||||||| ||| | |||| |||
Sbjct: 112 tccgtttcacaatataagtcattctagcatttcccacattcatattagatt------cat 59
Query: 71 caatatggatgtggggaatgctagaatgactta 103
||||||| || |||| |||||||||||||||||
Sbjct: 58 caatatgaatatgggaaatgctagaatgactta 26
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 72 aatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtac 125
|||||| ||||||| ||||||||||||||||| ||| | ||||| || ||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtac 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||| | |||| ||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgagaaatggtagaatgacttacatt 22
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttc 44
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttc 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||||||||||||||||||||||||||| || |||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||| ||| || | | |||||||||||||||||||||
Sbjct: 92 gattcattaatatcaacatgaatttagaaaatgctagaatgacttacatt 141
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||||| |||| || |||||||||||||
Sbjct: 80 gattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacatt 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||| ||||||||||||| || ||||| |||||||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacatt 100
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||||| || | | |||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatagtaaatgctagaatgactta 26
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 71 gattcattaatatcaatatgaatgtgggaaatgttagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| || ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacatt 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacatt 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| ||||| ||| |||||||||||||||||
Sbjct: 92 gattcattaaaatcaatatgaatgtgaaaaatactagaatgacttacatt 141
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| ||||| | |||||||||||||||||||||
Sbjct: 71 gattcattaccatcaatatgaatgtgagaaatgctagaatgacttacatt 22
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||||| ||||||||||||||||||||||| || ||||| ||| |||||||
Sbjct: 159 actactccctccgtttcacaatgtaagtcattctaacatttcccatatttata 107
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| ||||| || |||| |||| ||||||||||||||||
Sbjct: 91 gattcattaacattaatataaatatgggaaatgttagaatgacttacatt 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
|||||||| |||||||||||||| ||||||||
Sbjct: 12 tccgtttcgcaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || |||| |||||| ||||||||||||||
Sbjct: 90 gattcattaacatcaatatgaatatgggaaatgcttgaatgacttacatt 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/52 (92%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattt--cacatttata 53
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| ||||||||||||||||||||||| |||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcattt 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/50 (88%), Gaps = 2/50 (4%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 69 gatttattaacatcaatataaatgtga--aatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || || | |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatgagaaatgctagaatgacttacatt 22
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 74 tatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtact 126
|||| ||||||| ||||||||||||||||||||| ||||||| || |||||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagtact 147
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 138 tccgttttacaatgtaagtcattctagcatttcccacatt 99
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 67.9 bits (34), Expect = 3e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||| ||||| ||||||| |||||||||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaatgactta 26
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||| ||||||||| ||| ||| |||||||
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacatt 110
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||||| ||||| | |||||||||||||||||||||
Sbjct: 71 gattcattaatatcaatatgaatgtgagaaatgctagaatgacttacatt 22
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaa 121
|||| ||||||||||| || |||| ||||||||||||||||||||| | ||||| || ||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 122 gta 124
|||
Sbjct: 140 gta 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 135 tccgtttcacaatgtaagtcattctagcattt 104
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||||||||| ||||| | |||||||||||||||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||| |||||||||| ||||| | |||||||||||||||||
Sbjct: 59 gattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatag 55
||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagtattttccacattcatag 56
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| | ||||||||||||| ||||||||| ||| ||||
Sbjct: 142 tactacttcctccgtttcacaatataagtcattctaggattt 101
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 41 cattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgactt 102
|||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 83 cattaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactt 102
||||||||| |||||||||| ||||||| ||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatga 99
||||||||| |||||||||| ||||||| |||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagt 119
||||||||||||||||| ||||||| ||| ||||||||||||||||| | ||||| ||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 120 aagta 124
|||||
Sbjct: 147 aagta 151
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| ||| |||| |||||||||||
Sbjct: 144 tccgtttcacaatgtaagtcattctagtatttcccacatttata 101
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 60 ttcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||| ||||||| ||| ||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgactta 26
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||||||| || |||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacatt 51
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatag 55
||||||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 88 tccgtttcacaatgtaagtcattctagcatttcccacattcatag 44
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| || |||||||||||||||||||| ||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 74 tatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
|||| ||||||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttc 44
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttc 45
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| ||||||||| ||| ||||||
Sbjct: 124 tccgtttcacaatgtaagtcattctagcatttttcacgtttata 81
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttc 44
|||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttc 45
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatatagaaaatgctagaatgacttacatt 22
Score = 44.1 bits (22), Expect = 4e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
||||||||||||||| |||| || ||| |||||||||||| ||| | ||||| || |||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 123 ta 124
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacatt 92
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacatt 121
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||| ||||| |||| |||||| |||||||||||||||||
Sbjct: 71 gattcattagcatcagtatgaatgtggaaaatgctagaatgactta 26
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 14 gtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||| ||||||||| ||||||||||||||||
Sbjct: 15 gtttcataatataagtcattctagcattttccacatt 51
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| |||||||| | |||||||||
Sbjct: 82 tccgtttcacaatgtaagtcattctagcatttcctacatttata 39
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||||||||||| | ||||| ||||||||
Sbjct: 52 aatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcatt 33
|||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagcatttcccacatt 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattt 107
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 68 catcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagtac 125
|||||||||| ||||||| ||||||| ||||||||||||| | ||||| || ||||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||||||| || || | |||||||||||||||||||||
Sbjct: 79 gatttattaacatcaatataaatatgagaaatgctagaatgacttacatt 128
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcactttccacatt 51
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| |||||||| |||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttcccacatt 84
Score = 61.9 bits (31), Expect = 2e-09
Identities = 97/119 (81%), Gaps = 5/119 (4%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagttg-----attcatt 65
||||||||||||||||||| ||| |||||||| |||||| ||| || |||||||
Sbjct: 12 tccgtttcacaatgtaagttattctagcatttctcacattcatatatgtctagattcatt 71
Query: 66 aacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
| | |||||| ||||||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 72 agtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 130
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 63.9 bits (32), Expect = 5e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattttagtattttccacatt 51
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
||||||||||||||| |||||| ||| ||| ||||||||||||| | ||||| || |||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 123 ta 124
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcatt 33
|||||| |||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacatttata 55
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcatt 41
|||||||||||||| |||||||||||||||| |||||||
Sbjct: 102 ctactccttccgttccacaatgtaagtcattctagcatt 64
Score = 54.0 bits (27), Expect = 5e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 62 cattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaa 121
||||||||| ||||| ||||| | ||||||||||||||||||||| | ||||| || ||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 122 gta 124
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| ||||||||||||||||||||||| || ||||| |||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacatt 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| |||||| |||| ||||||||||||||||
Sbjct: 92 gattcattagcatcaatatgaatgtggtaaatgttagaatgacttacatt 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| ||||||||| ||||| | ||||||||||||||||| ||| | ||||| |
Sbjct: 71 gattcattagtatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 12
Query: 118 gtaagtac 125
| ||||||
Sbjct: 11 ggaagtac 4
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 63.9 bits (32), Expect = 5e-10
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||| ||||||||| |||||||| ||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcata-ttgattca 63
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 69 atcaatatggatgtggggaatgctagaatgactta 103
||||||||| ||||||| |||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgactta 26
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 5e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||||||||| ||||||| ||||||| |||||||||| || | ||||| |
Sbjct: 92 gattcattaacatcaatataaatgtgggaaatgctaaaatgacttactttgtgaaacgga 151
Query: 118 gtaagtac 125
| ||||||
Sbjct: 152 ggaagtac 159
Score = 63.9 bits (32), Expect = 5e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 151 tccgtttcacaaagtaagtcattttagcatttcccacatttata 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| |||||||||||| |||||||||| | |||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttata 55
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttac 104
||||||| ||||||||||| ||||||| ||||| | ||||||||||
Sbjct: 71 gattcataaacatcaatataaatgtgggaaatgcaaaaatgacttac 25
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 63.9 bits (32), Expect = 5e-10
Identities = 106/132 (80%), Gaps = 9/132 (6%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata--------- 54
|||||| ||||||||| ||||||||||||| || ||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatatatattcat 64
Query: 55 gttgattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaac 114
| ||||||||||||| |||||| || ||| |||||||||| |||||||||| | ||||
Sbjct: 65 ctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaac 124
Query: 115 gaagtaagtact 126
| || |||||||
Sbjct: 125 ggaggaagtact 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttcca 46
|||||||||||||||||||| || ||||||||||||
Sbjct: 127 tccgtttcacaatgtaagtccttctagcattttcca 92
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| |||||||||| ||||| | ||||||||||||||||| ||| | ||||| |
Sbjct: 69 gattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgga 128
Query: 118 gtaagta 124
| |||||
Sbjct: 129 ggaagta 135
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacat 106
|||||| |||||||||| ||||| | ||||||||||||||||||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacat 23
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| || |||| || |||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||| ||||| ||||||| ||||||| |||||||||||||
Sbjct: 92 gattcattaccatctatatgaatgtgggcaatgctaaaatgacttacatt 141
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacatt 112
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacatt 111
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| |||||| ||| ||||||||||||||||
Sbjct: 91 gattcattaacatcaatatgaatgtggaaaatattagaatgacttacatt 140
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||| | | ||||||||||||||||||| | ||||| |
Sbjct: 71 gattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || | || |||||||||||||||||||||
Sbjct: 92 gattcattaacatctatatgaatataggcaatgctagaatgacttacatt 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcatt 41
|||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 160 actactccctccgtttcataatgtaagtcattctagcatt 121
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccacctttata 55
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| | ||||||| ||||||||||||| ||||||||
Sbjct: 147 ctactcccttcgtttcataatgtaagtcattctagcattt 108
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||||| | ||||||||
Sbjct: 109 aatgctagaatgacttacattatgaaacgaag 140
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||| |||||| || ||||||| ||||||||||||||||| ||| | ||||| |
Sbjct: 69 gattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgga 128
Query: 118 gtaagta 124
| |||||
Sbjct: 129 ggaagta 135
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattt 42
|||||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 3 actactccctccgtttcacaatataagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 128 tccgtttcacaatataagtcattctagcatttcccacatt 89
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||| |||||| || ||||| | |||||||||||||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgactta 26
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||||||||||||| ||| ||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttata 55
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||||||| ||||| |||||||||| |||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacatt 100
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||||||||| |||| | ||||||||||||| |||||||
Sbjct: 81 attcattagcatcaatatgaatgtagaaaatgctagaatgatttacatt 129
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||||| |||||||||| | |||||||| | ||||| |
Sbjct: 92 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 151
Query: 118 gtaagta 124
| |||||
Sbjct: 152 ggaagta 158
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||| ||||||||| || | ||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgaggaatgctaaaaagtcttacatt 22
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||| | | ||||||||||||||||||| | ||||| |
Sbjct: 92 gattcattaacatccatatgaatgtgagcattgctagaatgacttacattatgaaacgga 151
Query: 118 gtaagta 124
| |||||
Sbjct: 152 ggaagta 158
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || | || |||||||||||||||||||||
Sbjct: 71 gattcattaacatctatatgaatataggcaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcatt 41
|||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 3 actactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| |||||| ||||||| ||||||| ||||||||| ||| | ||||| |
Sbjct: 71 gattcattaacataaatatgaatgtgggaaatgctacaatgacttatattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||||||||||||| |||| |||| ||||||||| ||||||||||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttata 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 12 tccgtttcacaatataagtcattgtagcatttcccacatt 51
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||||| |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||| | ||||||| || | ||||||||
Sbjct: 92 gattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacatt 141
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||||| ||| |||||| |||||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatactagaaagacttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || || | |||||||||| | ||||||||
Sbjct: 92 gattcattaacatctatatgaatatgagcaatgctagaaagtcttacatt 141
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||| |||| |||||| ||||| | |||||||||||||||||||||
Sbjct: 72 gattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacatt 22
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 131 tccgtttcacaatgtaagtcattctagcattt 100
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||||||||| || ||| |||| |||||||||||||||| | ||||| ||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaacggag 11
Query: 119 taagta 124
|||||
Sbjct: 10 gaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttcca 46
||||||||||||||||||||||| || |||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaacattttcca 47
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatttt 43
|||||| ||||||||| ||||||||||||| ||| |||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttt 97
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttc 44
||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttc 45
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||||| |||| ||| |||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacatt 112
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||| |||| || ||||| ||||||| |||||||||||||||||||||
Sbjct: 92 gattcactaacctccatatgaatgtgggaaatgctagaatgacttacatt 141
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 5 actccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||| ||||||||| ||||||||||||| |||||||| |||||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacatt 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||| |||| || ||||| || | || |||||||||||||||||||||
Sbjct: 71 gattcactaacctctatatgaatataggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| || |||| ||| |||||||||||||||||
Sbjct: 70 gattcattagcatcaatatgaatatgggaaatactagaatgacttacatt 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| ||||||||| ||||||||||||| ||| ||||
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtattt 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattt 42
||||||| | ||||||||||||||||||| ||| ||| ||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtaattctagtattt 43
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttatagt 56
||||||||| ||||||||||||| ||||||||| |||||| |||||
Sbjct: 12 tccgtttcataatgtaagtcattctagcatttttcacattcatagt 57
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| |||||||||| |||| ||||||| ||| |||||||||||||||||
Sbjct: 78 gatttattaacatcactatgaatgtgggaaatactagaatgacttacatt 127
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 63 attaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaag 122
|||||||||| |||| ||||| ||||||||||||||||||||| | ||||| || |||
Sbjct: 66 attaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 123 ta 124
||
Sbjct: 6 ta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagt 56
|||||| || |||||| ||||||||||||| ||| |||| ||||||| |||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagt 92
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||||| |||||||||| | ||||||||
Sbjct: 81 gattcattaacatctatatgtatgtgggcaatgctagaaagtcttacatt 130
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||||||||| || |||| ||||||| |||||||||
Sbjct: 83 gattcattaacatcaatatgaatatgggaaatgctaaaatgactta 128
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||| ||||||||| ||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcattt 111
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 60.0 bits (30), Expect = 7e-09
Identities = 102/126 (80%), Gaps = 5/126 (3%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagtt-----g 58
|||||| ||||||| ||||||||||||||| ||| |||| |||||| ||| | |
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatatctatctag 64
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
|||||||||||||||||| | ||| ||||||||||||||||||||| | ||||| ||
Sbjct: 65 attcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaacggag 124
Query: 119 taagta 124
|||||
Sbjct: 125 gaagta 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcatttt 43
||||||||||||||||||||||| |||||||||
Sbjct: 123 tccgtttcacaatgtaagtcattctagcatttt 91
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacat 49
|||||| ||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||| ||||| ||| ||||||||| |||||||||||| |||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttata 89
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 67 acatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||| ||||| | ||||||||||||||||||||| | ||||| || |||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 3e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| | ||||||||||||||||||||||| ||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcat 40
||||||||| ||||||||||||||||||||| | ||||||
Sbjct: 114 tactactccctccgtttcacaatgtaagtcaatctagcat 75
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| ||||| | ||| ||| |||||||||||||
Sbjct: 81 gattcattaacatcaatatgaatgtgagaaatactaaaatgacttacatt 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| || |||||||||||||||||||| ||| |||| ||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttata 55
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtattt 109
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||||| |||||||||| | ||||||||
Sbjct: 74 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 123
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| | ||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 117 tactacttcctccgtttcacaatataagtcattctagcatttcccacatt 68
Score = 58.0 bits (29), Expect = 3e-08
Identities = 99/121 (81%), Gaps = 11/121 (9%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttatagttgattca 63
|||||| ||||||||||||| ||||||||| ||||| |||||||||| ||| |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcata-ttgat--- 59
Query: 64 ttaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagt 123
|||||||| ||||||| ||||||||||||||||| ||| | ||||| || ||||
Sbjct: 60 ------tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagt 113
Query: 124 a 124
|
Sbjct: 114 a 114
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacattta 52
|||| ||||||||||||||| ||||||||| ||||||||| || |||||
Sbjct: 5 tacttcttccgtttcacaatataagtcattttagcatttttcatattta 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| || |||||| ||||||
Sbjct: 123 tccgtttcacaatataagtcattttaacatttttcacatt 84
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| ||||| ||||||| |||||||||| | ||||||||
Sbjct: 70 attcattaacatctatatgaatgtgggcaatgctagaaagtcttacatt 22
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacat 106
|||||||||||||||||||| |||||| |||| |||| ||||||||||
Sbjct: 64 gattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| |||||||||| |||||||||| | || |||||||||||||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacatt 84
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||| || |||||| ||||||||||||| ||||||||| ||||||
Sbjct: 160 actactccctctgtttcataatgtaagtcattgtagcatttttcacatt 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||| ||||||| |||| || || | |||||||||||||||||||||
Sbjct: 71 gattcactaacatctatatcaatatgagaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaagtcattatagcattttccacatttat 53
||||||| | |||||||||||||||||| | || ||||||| |||||||||||
Sbjct: 159 tactacttcctccgtttcacaatgtaagactttttagcattgtccacatttat 107
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 69 atcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||| || |||| ||||||||||||||||||||| | ||||| || |||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 130 tccgtttcacaatgtaagtcattctagcattt 99
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctaga 95
|||||||||||||||||||| ||||||| |||| ||||
Sbjct: 72 gattcattaacatcaatatgaatgtgggaaatgttaga 35
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtc 30
|||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtc 31
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||||||||||| |||||||| ||| ||||| ||||||||||
Sbjct: 101 tccgtttcacaatgcaagtcattctagtatttttcacatttata 58
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcatt 33
|||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatttt 43
|||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttt 65
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacat 49
|||||| | ||||||||||| ||||||||| ||| ||||| |||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 102 tccgtttcacaatgtaagtcattttagtatttcccacatt 63
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcatt 33
|||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||| |||||||||||||||||| | || ||||||| ||||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacatt 94
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttcca 46
|||||| |||||||||||||||||| | || ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatcca 47
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatttt 43
|||||| ||||||||||||||||||||||| || ||||||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttt 92
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||| |||||||||| | ||| |||| ||||||||||||||||
Sbjct: 65 gattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacatt 114
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||||||||||||||| | ||||| || ||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 61 tcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaagta 120
||||| |||||||||| ||||| | ||||||||||||||||| ||| ||||||| || |
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 121 agta 124
||||
Sbjct: 90 agta 93
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||||||||||||| ||||||||
Sbjct: 119 tccgtttcacaatgtaagtcattctagcattt 88
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||||||||| ||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 65 taacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||| || ||||||| ||||||||||| |||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataactta 26
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||||||||||| | ||||| || |||||
Sbjct: 89 aatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| ||||||||| ||||||
Sbjct: 130 tccgtttcacaatataagtcattttagcatttttcacatt 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
||||||||||||| ||||||||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcattt 43
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||| |||||||| || || | |||||||||||||||||
Sbjct: 71 gattcattaatatcaatatctatatgagaaatgctagaatgactta 26
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 43 gattcattaacatccatatgaatgtgggcaatgctagaa 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| |||| |||||
Sbjct: 70 gattcattaacatccatatgaatgtgggcaatgttagaa 108
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| ||||| ||||||| |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| |||||||||||||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| ||| ||||||||||||| ||||| ||||||||| || |||||||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttata 56
Score = 50.1 bits (25), Expect = 7e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattat 35
|||||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattat 36
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| ||||| | |||||||||| | |||||||| | ||||| |
Sbjct: 92 gattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacgga 151
Query: 118 gtaagta 124
| |||||
Sbjct: 152 ggaagta 158
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 66 gattcattaacatctatatgaatgtgggcaatgctagaa 104
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacat 49
|||||| |||||||||||||||| |||||||| ||||||
Sbjct: 12 tccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagc 38
|||||| ||||||||||||||||||||||| ||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 79 atgtggggaatgctagaatgacttacatt 107
||||||| |||||||||||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttcc 45
||||||||||||| ||||||||| |||||||||||
Sbjct: 125 tccgtttcacaatataagtcattttagcattttcc 91
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtttcacaatgtaagtcattatagcattt 42
|||||||||||||||||||| ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 atatggatgtggggaatgctagaatgacttacatt 107
||||| ||| ||| |||||||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacatt 22
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 70 gattcattaacatctatatgtatgtgggtaatgctagaa 108
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 71 gattcattaacatctatatgtatgtgggtaatgctagaa 33
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||| ||||||||| ||||||| ||| ||||||||||||| ||| | ||||| |
Sbjct: 71 gattcattagtatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 50.1 bits (25), Expect = 7e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||| ||||||||| ||||||||||||| | ||||| |||||||
Sbjct: 157 actactccctccgtttcataatgtaagtcattccaccatttcccacatt 109
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||| ||||||||| ||| |||| |||||||
Sbjct: 12 tccgtttcacaatataagtcattctagtatttcccacatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 68 catcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||||| |||| | ||||||||||||||
Sbjct: 99 catcaatatgaatgtgggaaatggtggaatgacttacatt 138
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgggcaatgctagaa 33
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 94 gattcattaacatctatatgaatgtgggcaatgctagaa 132
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||||||||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt 43
Score = 54.0 bits (27), Expect = 5e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatttata 54
|||||| || |||||| ||||||||||||| || |||||| ||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttata 93
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 68 catcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||||| | ||| |||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacatt 22
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||| ||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcattt 43
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 93 gattcattaacatctatatgaatgtgggcaatgctagaa 131
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 54.0 bits (27), Expect = 5e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||| ||||||||||||||| || |||| ||||||| |||||||| |||| | ||||| |
Sbjct: 70 gatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaacgga 129
Query: 118 gtaagta 124
| |||||
Sbjct: 130 ggaagta 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||| ||| ||| |||| |||||||
Sbjct: 12 tccgtttcacaatgtaagttattctagtatttcccacatt 51
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattt 42
|||||||||||||| |||||||| ||||||||
Sbjct: 129 tccgtttcacaatgcaagtcattttagcattt 98
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 68 gattcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 47 gattcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 5e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 60 gattcattaacatctatatgaatgtgggcaatgctagaa 98
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 54.0 bits (27), Expect = 5e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttat 53
||||||||||||| ||||||||| |||||||||| | ||||||
Sbjct: 82 tccgtttcacaatataagtcattctagcattttctatatttat 40
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcat 40
||||||||||| ||||||||||| ||||||
Sbjct: 12 tccgtttcacagtgtaagtcattctagcat 41
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagta 124
||||||||||||||||| ||| | ||||| ||||||||
Sbjct: 52 aatgctagaatgacttatattgtgaaacggagtaagta 89
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 5e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| ||||||| | ||||||||||||| || |||||||||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacatt 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacg 115
|||||| ||||||| ||| | |||||| |||| |||||||||||||||| |||||||
Sbjct: 72 gattcactaacatccatacgaatgtggaaaatgttagaatgacttacattataaaacg 129
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattt 42
|||||| ||||||||| ||||||||||||| || |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacattt 43
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||| ||||||||| ||||| |||||| ||||||||||| |||||||||
Sbjct: 71 gatttattaacatctatatgaatgtggacaatgctagaataacttacatt 120
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 79 atgtggggaatgctagaatgacttacattttaaaacgaagtaagta 124
||||||| ||||||||||| ||||||||| | ||||| || |||||
Sbjct: 50 atgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| | ||| ||||||| |||||||||| | ||||||||
Sbjct: 71 gattcattaacatctaaatgaatgtgggtaatgctagaaagtcttacatt 22
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| |||||||||||||||||| | || |||||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcatt 123
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||||||||| || | || |||||||||| | ||||||||
Sbjct: 71 gattcattaacatcaatatgaatataggcaatgctagaaagtcttacatt 22
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
||||||||||||| ||||| |||||| |||||||||| | |||||||| | ||||| |
Sbjct: 90 gattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatgaaacgga 149
Query: 118 gtaagta 124
| |||||
Sbjct: 150 ggaagta 156
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| |||||| |||||||||| | ||||||||
Sbjct: 66 gattcattaacatctatatgaatgtggacaatgctagaaagtcttacatt 115
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||||| ||| |||||| | ||||||||
Sbjct: 92 gattcattaacatctatatgaatgtgggcaatactagaaagtcttacatt 141
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||| ||| |||||||||| | ||||||||
Sbjct: 92 gattcattaacatctatatgaatgcgggcaatgctagaaagtcttacatt 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| |||||||||||||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 50.1 bits (25), Expect = 7e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctag 94
|||||||| ||||||||||| ||||||| ||||||||
Sbjct: 52 gattcattgacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 50.1 bits (25), Expect = 7e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccaca 48
|||||| |||||||||||||||||| | || ||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtccaca 49
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatttat 53
|||||||||||||||||| | || ||| ||| |||||||||||
Sbjct: 111 tccgtttcacaatgtaaggctttctagtattgtccacatttat 69
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 7e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| | ||| ||||||| |||||||||| | ||| |||| | ||||| |
Sbjct: 71 gattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacgga 12
Query: 118 gtaagtact 126
| |||||||
Sbjct: 11 ggaagtact 3
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 ctactccttccgtttcacaatgtaag 28
||||||| ||||||||||||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaag 134
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||||||||||||| ||| ||| |||| |||||||
Sbjct: 133 tccgtttcacaatgtaagttattgtagaatttcccacatt 94
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||||||||||||||| | || ||||||| ||||||||
Sbjct: 12 tccgtttcacaatgtaagactttctagcattatccacatt 51
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| | ||| |||||| |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 1 tactactccttccgtttcacaatgtaag 28
||||||||| ||||||||||||||||||
Sbjct: 123 tactactccctccgtttcacaatgtaag 96
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2 actactccttccgtttcacaatgtaagtcatt 33
|||||||| ||||||||| |||||||||||||
Sbjct: 3 actactccctccgtttcataatgtaagtcatt 34
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcattttccacatt 50
||||||||| ||||||||||||| ||||||| || |||||
Sbjct: 129 tccgtttcataatgtaagtcattctagcattgtctacatt 90
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 87 aatgctagaatgacttacattttaaaacgaagtaagtac 125
||||||||||||||||||||| | ||||| || ||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagtac 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||| ||| ||||| || |||| ||| ||||||||||||||||
Sbjct: 71 gattcattaatatctatatgcatatgggcaatattagaatgacttacatt 22
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tactactccttccgtttcacaatgtaag 28
||||||||| ||||||||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaag 29
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 2 actactccttccgtttcacaatgtaag 28
|||||||| ||||||||||||||||||
Sbjct: 160 actactccctccgtttcacaatgtaag 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| ||||| | |||||||| | | ||||||||
Sbjct: 71 gattcattaacatctatatgaatgtgagcaatgctaggaagtcttacatt 22
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgcta 93
||||||||||||| ||||| ||||||| |||||||
Sbjct: 77 attcattaacatctatatgaatgtgggcaatgcta 111
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||||| | || ||| ||| ||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacatt 112
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||| ||||| || || | ||||||| |||| |||||||| | ||||| ||
Sbjct: 72 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 131
Query: 119 taagtac 125
||||||
Sbjct: 132 gaagtac 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 11 tccgtttcacaatgtaagtcattatagcatt 41
|||||||||||||||||| |||| |||||||
Sbjct: 130 tccgtttcacaatgtaagacattttagcatt 100
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||| | | ||| ||||||| |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttcca 46
|||||| |||||||||||||||||| | || ||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtcca 116
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || ||| |||||||||| | ||||||||
Sbjct: 92 gattcattaacatctatatgtatatggacaatgctagaaagtcttacatt 141
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 59 attcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaag 118
||||||||||||| ||||| || || | ||||||| |||| |||||||| | ||||| ||
Sbjct: 70 attcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggag 11
Query: 119 taagtac 125
||||||
Sbjct: 10 gaagtac 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 tccgtttcacaatgtaagtcattatagcatt 41
|||||||||||||||||| |||| |||||||
Sbjct: 12 tccgtttcacaatgtaagacattttagcatt 42
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| ||||| |||| | |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 66 gattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacgaa 117
|||||||||||||| | ||| || |||| |||||||||| | |||||||| | ||||| |
Sbjct: 71 gattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaacgga 12
Query: 118 gtaagta 124
| |||||
Sbjct: 11 ggaagta 5
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| | ||||| ||| |||||| | ||||||||
Sbjct: 92 gattcattaacatccatatgtacgtgggcaatactagaaagtcttacatt 141
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 92 gattcattaacatatatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcattttccacatt 50
|||||| |||||||||||||||||| | || ||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacatt 51
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| ||| ||||||
Sbjct: 71 gattcattaacatctatatgaatgtgggcaattctagaa 33
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaa 96
|||||||||||||| ||||| ||||||| |||||||||
Sbjct: 47 gattcattaacatctatatgaatgtgggtgatgctagaa 9
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
|||||||||||||| ||||| || || | |||||||||| ||||||
Sbjct: 71 gattcattaacatctatatgaatatgagcaatgctagaaagactta 26
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgactta 103
||||||||| |||||||||| || || | |||| ||||||||||||
Sbjct: 92 gattcattagcatcaatatgaatatgagaaatgttagaatgactta 137
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||||| || |||| ||| |||||| | ||||||||
Sbjct: 92 gattcattaacatctatatgaatatgggcaatactagaaagtcttacatt 141
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 44.1 bits (22), Expect = 4e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacattttaaaacg 115
|||||||||||||| |||| ||||||| |||| ||||| | |||| ||| |||||||
Sbjct: 68 gattcattaacatctatatatatgtgggcaatgttagaaagtcttatattgtaaaacg 125
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| |||||||||||||||||| | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
||||||||||||| ||||| ||||||| || ||||||| | ||||||||
Sbjct: 71 gattcattaacatatatatgaatgtgggcaaggctagaaagtcttacatt 22
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 58 gattcattaacatcaatatggatgtggggaatgctagaatgacttacatt 107
|||||||||||||| ||| ||||||| |||||||||| | ||||||||
Sbjct: 71 gattcattaacatccataaaaatgtgggcaatgctagaaagtcttacatt 22
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 4 tactccttccgtttcacaatgtaagtcattatagcatt 41
|||||| |||||||||||||||||| | || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcatt 121
