miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00648;MIR396;AARH01003359.1/52522-52352 3694:Populus
          trichocarpa
          Length = 171

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  ttttccacggctttcttgaactt 29
          |||||||||||||||||||||||
Sbjct: 9  ttttccacggctttcttgaactt 31




>RF00648;MIR396;AM481354.2/2056-2230 29760:Vitis vinifera
          Length = 175

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 7  ttttccacggctttcttgaactt 29
          |||||||||||||||||||||||
Sbjct: 9  ttttccacggctttcttgaactt 31




>RF00648;MIR396;AARH01003151.1/856908-856779 3694:Populus
          trichocarpa
          Length = 130

 Score = 44.1 bits (22), Expect = 4e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 7  ttttccacggctttcttgaact 28
          ||||||||||||||||||||||
Sbjct: 9  ttttccacggctttcttgaact 30