miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00704;MIR397;ABIM01007603.1/10199-10104 3649:Carica papaya
          (papaya)
          Length = 96

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 acatcattgagtgcagcgttga 35
          ||||||||||||||||||||||
Sbjct: 8  acatcattgagtgcagcgttga 29




>RF00704;MIR397;AC189186.2/40150-40047 51351:Brassica rapa subsp.
          pekinensis
          Length = 104

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 acatcattgagtgcagcgttga 35
          ||||||||||||||||||||||
Sbjct: 8  acatcattgagtgcagcgttga 29




>RF00704;MIR397;AC012392.1/95144-95040 3702:Arabidopsis thaliana
          (thale cress)
          Length = 105

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 acatcattgagtgcagcgttga 35
          ||||||||||||||||||||||
Sbjct: 8  acatcattgagtgcagcgttga 29




>RF00704;MIR397;EF148834.1/45-164 3695:Populus trichocarpa x
          Populus deltoides
          Length = 120

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 acatcattgagtgcagcgttga 35
          ||||||||||||||||||||||
Sbjct: 8  acatcattgagtgcagcgttga 29




>RF00704;MIR397;CAAP02007812.1/4570-4691 29760:Vitis vinifera
          Length = 122

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 acatcattgagtgcagcgttga 35
          ||||||||||||||||||||||
Sbjct: 8  acatcattgagtgcagcgttga 29