miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q39123|ATHB8_ARATH Homeobox-leucine zipper protein ATHB-8
OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1
Length = 833
Score = 100 bits (248), Expect = 4e-21
Identities = 46/54 (85%), Positives = 50/54 (92%)
Frame = -3
Query: 162 QHNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
QH+ TPQH PRDASPAGLLSIA+ETLTEF+SKA G AV+WVQMPGMKPGPDSIG
Sbjct: 140 QHHLTPQHQPRDASPAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGPDSIG 193
>sp|Q5QMZ9|HOX29_ORYSJ Homeobox-leucine zipper protein HOX29
OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2
Length = 868
Score = 92.4 bits (228), Expect = 8e-19
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -3
Query: 162 QHNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
QHN Q PPRDASPAGL+SIAEETLTEFLSKA G AV+W+QMPGMKPGPDSIG
Sbjct: 160 QHNVV-QPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIG 212
>sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29
OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2
Length = 861
Score = 92.4 bits (228), Expect = 8e-19
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -3
Query: 162 QHNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
QHN Q PPRDASPAGL+SIAEETLTEFLSKA G AV+W+QMPGMKPGPDSIG
Sbjct: 153 QHNVV-QPPPRDASPAGLMSIAEETLTEFLSKATGTAVEWLQMPGMKPGPDSIG 205
>sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15
OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1
Length = 836
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = -3
Query: 162 QHNPTPQHPPRDASPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
QH Q+P RDASPAGLLSIAEETL EFLSKA G AV+WVQMPGMKPGPDSIG
Sbjct: 141 QHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIG 194
>sp|Q6TAQ6|HOX10_ORYSJ Homeobox-leucine zipper protein HOX10
OS=Oryza sativa subsp. japonica GN=HOX10 PE=2 SV=1
Length = 839
Score = 89.4 bits (220), Expect = 7e-18
Identities = 43/51 (84%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Frame = -3
Query: 150 TPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
TPQ+P RDAS P+GLLSIAEETLTEFLSKA G A+DWVQMPGMKPGPDS+G
Sbjct: 148 TPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVG 198
>sp|A2XBL9|HOX10_ORYSI Homeobox-leucine zipper protein HOX10
OS=Oryza sativa subsp. indica GN=HOX10 PE=2 SV=2
Length = 839
Score = 89.4 bits (220), Expect = 7e-18
Identities = 43/51 (84%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Frame = -3
Query: 150 TPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
TPQ+P RDAS P+GLLSIAEETLTEFLSKA G A+DWVQMPGMKPGPDS+G
Sbjct: 148 TPQNPLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMPGMKPGPDSVG 198
>sp|Q9SE43|REV_ARATH Homeobox-leucine zipper protein REVOLUTA
OS=Arabidopsis thaliana GN=REV PE=1 SV=2
Length = 842
Score = 88.6 bits (218), Expect = 1e-17
Identities = 44/51 (86%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = -3
Query: 150 TPQHPPRDA-SPAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
TPQH RDA SPAGLLSIAEETL EFLSKA G AVDWVQMPGMKPGPDS+G
Sbjct: 144 TPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVG 194
>sp|O04291|ATB14_ARATH Homeobox-leucine zipper protein ATHB-14
OS=Arabidopsis thaliana GN=ATHB-14 PE=1 SV=1
Length = 852
Score = 87.8 bits (216), Expect = 2e-17
Identities = 44/55 (80%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NP PQH RDA+ PAGLLSIAEE L EFLSKA G AVDWVQM GMKPGPDSIG
Sbjct: 153 QQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIG 207
>sp|O04292|ATBH9_ARATH Homeobox-leucine zipper protein ATHB-9
OS=Arabidopsis thaliana GN=ATHB-9 PE=1 SV=1
Length = 841
Score = 85.5 bits (210), Expect = 1e-16
Identities = 43/55 (78%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NPT QHP RD + PA LLSIAEETL EFL KA G AVDWVQM GMKPGPDSIG
Sbjct: 149 QQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIG 203
>sp|Q9AV49|HOX9_ORYSJ Homeobox-leucine zipper protein HOX9 OS=Oryza
sativa subsp. japonica GN=HOX9 PE=2 SV=1
Length = 840
Score = 85.1 bits (209), Expect = 1e-16
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = -3
Query: 150 TPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
TPQ+P RDAS P+GLL+IAEETLTEFLSKA G AVDWV MPGMKPGPDS G
Sbjct: 150 TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFG 200
>sp|A2Z8L4|HOX9_ORYSI Homeobox-leucine zipper protein HOX9 OS=Oryza
sativa subsp. indica GN=HOX9 PE=2 SV=2
Length = 840
Score = 85.1 bits (209), Expect = 1e-16
Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
Frame = -3
Query: 150 TPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
TPQ+P RDAS P+GLL+IAEETLTEFLSKA G AVDWV MPGMKPGPDS G
Sbjct: 150 TPQNPLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFG 200
>sp|Q2QM96|HOX33_ORYSJ Homeobox-leucine zipper protein HOX33
OS=Oryza sativa subsp. japonica GN=HOX33 PE=2 SV=1
Length = 855
Score = 83.6 bits (205), Expect = 4e-16
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NP HP RDA+ PAGLL+IAEETL EF+SKA G AV+WVQM GMKPGPDSIG
Sbjct: 157 QQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIG 211
>sp|A2ZMN9|HOX33_ORYSI Homeobox-leucine zipper protein HOX33
OS=Oryza sativa subsp. indica GN=HOX33 PE=2 SV=2
Length = 855
Score = 83.6 bits (205), Expect = 4e-16
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NP HP RDA+ PAGLL+IAEETL EF+SKA G AV+WVQM GMKPGPDSIG
Sbjct: 157 QQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPDSIG 211
>sp|Q6AST1|HOX32_ORYSJ Homeobox-leucine zipper protein HOX32
OS=Oryza sativa subsp. japonica GN=HOX32 PE=2 SV=1
Length = 859
Score = 83.6 bits (205), Expect = 4e-16
Identities = 42/55 (76%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NP P RDA+ PAGLL+IAEETL EFLSKA G AVDWVQM GMKPGPDSIG
Sbjct: 160 QQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIG 214
>sp|A2XK30|HOX32_ORYSI Homeobox-leucine zipper protein HOX32
OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1
Length = 859
Score = 83.6 bits (205), Expect = 4e-16
Identities = 42/55 (76%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = -3
Query: 162 QHNPTPQHPPRDAS-PAGLLSIAEETLTEFLSKAKGAAVDWVQMPGMKPGPDSIG 1
Q NP P RDA+ PAGLL+IAEETL EFLSKA G AVDWVQM GMKPGPDSIG
Sbjct: 160 QQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGMKPGPDSIG 214
