miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39483_ppt-MIR319d:mirbase
          Length = 170

 Score =  139 bits (70), Expect = 7e-34
 Identities = 116/130 (89%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 30  gtcgaaggttgtaccgctgccgactcaaacttccggcttccatatcacgacgcgtgatat 89
           |||||||||||| | |||||||||||||||||||||||||| |||| | || | || |||
Sbjct: 36  gtcgaaggttgtgctgctgccgactcaaacttccggcttccctatc-caacccctggtat 94

                                                                       
Query: 90  ggaatccgaaggtctgatccgggagctgatcgatctccaggttagcatctcttggactga 149
           |||||||||| ||||||| ||||||||| || |||||| | |||||||||||||||||||
Sbjct: 95  ggaatccgaatgtctgatacgggagctgttcaatctccggcttagcatctcttggactga 154

                     
Query: 150 agggagctcc 159
           ||||||||||
Sbjct: 155 agggagctcc 164




>39482_ppt-MIR319c:mirbase
          Length = 189

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 90  ggaatccgaaggtctgatccgggagctgatcgatctccaggttagcatctcttggactga 149
           |||||||||| ||||||| |||||||||| || ||| ||  | ||| |||||||||||||
Sbjct: 104 ggaatccgaatgtctgatgcgggagctgagcggtcttcaactcagcttctcttggactga 163

                     
Query: 150 agggagctcc 159
           ||||||||||
Sbjct: 164 agggagctcc 173




>39484_ppt-MIR319e:mirbase
          Length = 174

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 35 aggttgtaccgctgccgactcaaacttccggcttcc 70
          |||||| || |||||||| |||||||||||||||||
Sbjct: 43 aggttgcactgctgccgattcaaacttccggcttcc 78



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 60/71 (84%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                       
Query: 90  ggaatccgaaggtctgatccgggagctgatcgatctccaggtt-agcatctcttggactg 148
           |||||||||| ||||||| |||||||||  || ||| ||  || |||  |||||||||||
Sbjct: 96  ggaatccgaatgtctgatgcgggagctgtgcggtcttcaactttagcgcctcttggactg 155

                      
Query: 149 aagggagctcc 159
           |||||||||||
Sbjct: 156 aagggagctcc 166




>39480_ppt-MIR319a:mirbase
          Length = 169

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 137 tctcttggactgaagggagctcc 159
           |||||||||||||||||||||||
Sbjct: 145 tctcttggactgaagggagctcc 167




>41635_vvi-MIR319b:mirbase
          Length = 194

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 tcttggactgaagggagctcc 159
           |||||||||||||||||||||
Sbjct: 161 tcttggactgaagggagctcc 181




>41410_ptc-MIR319g:mirbase
          Length = 204

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 cttggactgaagggagctcct 160
           |||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcct 195




>41409_ptc-MIR319f:mirbase
          Length = 202

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 cttggactgaagggagctcct 160
           |||||||||||||||||||||
Sbjct: 173 cttggactgaagggagctcct 193




>41026_pvu-MIR319c:mirbase
          Length = 734

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 cttggactgaagggagctcct 160
           |||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcct 429




>40368_rco-MIR319b:mirbase
          Length = 179

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 tcttggactgaagggagctcc 159
           |||||||||||||||||||||
Sbjct: 152 tcttggactgaagggagctcc 172




>42642_tae-MIR319:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctcc 202




>41770_bdi-MIR319:mirbase
          Length = 280

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctcc 244




>41638_vvi-MIR319f:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 161 cttggactgaagggagctcc 180




>41637_vvi-MIR319e:mirbase
          Length = 107

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 77  ttggactgaagggagctcct 96




>41636_vvi-MIR319c:mirbase
          Length = 182

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 150 cttggactgaagggagctcc 169




>41544_sly-MIR319:mirbase
          Length = 168

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 149 cttggactgaagggagctcc 168




>41411_ptc-MIR319h:mirbase
          Length = 195

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184




>41408_ptc-MIR319e:mirbase
          Length = 192

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183




>41407_ptc-MIR319d:mirbase
          Length = 193

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 164 cttggactgaagggagctcc 183




>41406_ptc-MIR319c:mirbase
          Length = 196

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 167 cttggactgaagggagctcc 186




>41404_ptc-MIR319a:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178




>41282_ctr-MIR319:mirbase
          Length = 186

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 156 cttggactgaagggagctcc 175




>41236_csi-MIR319:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 91  ttggactgaagggagctcct 110




>41185_aqc-MIR319:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173




>41129_tcc-MIR319:mirbase
          Length = 133

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 94  ttggactgaagggagctcct 113




>40704_mtr-MIR319b:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 155 cttggactgaagggagctcc 174




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187




>40465_gma-MIR319b:mirbase
          Length = 208

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctcc 188




>40464_gma-MIR319a:mirbase
          Length = 207

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187




>40370_rco-MIR319d:mirbase
          Length = 187

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctcct 181




>40369_rco-MIR319c:mirbase
          Length = 188

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181




>40367_rco-MIR319a:mirbase
          Length = 211

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204




>40071_ath-MIR319c:mirbase
          Length = 199

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcct 189




>40070_ath-MIR319b:mirbase
          Length = 172

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctcc 170




>39861_aly-MIR319d:mirbase
          Length = 267

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223




>39860_aly-MIR319c:mirbase
          Length = 271

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ttggactgaagggagctcct 160
           ||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223




>39859_aly-MIR319b:mirbase
          Length = 246

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctcc 209




>39740_smo-MIR319:mirbase
          Length = 215

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 cttggactgaagggagctcc 159
           ||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204