miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51423_ppt-miR535d:pmrd
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 ggtgacaacgagagagagcacgccggaatgcgttcatgcagcgagtgcctggaggtgttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaacgagagagagcacgccggaatgcgttcatgcagcgagtgcctggaggtgttc 60
Query: 61 gagcgtgccctctcccgtcgtcacc 85
|||||||||||||||||||||||||
Sbjct: 61 gagcgtgccctctcccgtcgtcacc 85
>51422_ppt-miR535c:pmrd
Length = 81
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2 gtgacaacgagagagagcacgccggaatgcgttca 36
|||||||||||||||||||||| ||||||| ||||
Sbjct: 1 gtgacaacgagagagagcacgctggaatgctttca 35
>51420_ppt-miR535a:pmrd
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ggtgacaacgagagagagcacgccggaatgc 31
||||||||||||||||||||||| |||||||
Sbjct: 25 ggtgacaacgagagagagcacgctggaatgc 55
>51421_ppt-miR535b:pmrd
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 2 gtgacaacgagagagagcacgccggaatgc 31
|||||||||||||||||||||| |||||||
Sbjct: 1 gtgacaacgagagagagcacgctggaatgc 30
>49023_osa-miR535:pmrd
Length = 94
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ggtgacaacgagagagagcacgccgg 26
||||||||||||||||||||||||||
Sbjct: 4 ggtgacaacgagagagagcacgccgg 29
>54900_vvi-miR535e:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>54899_vvi-miR535d:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>54898_vvi-miR535c:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>54897_vvi-miR535b:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>54896_vvi-miR535a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>54390_rco-miR535:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 11 tgacaacgagagagagcacgc 31
>46905_aqc-miR535:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 tgacaacgagagagagcacgc 23
|||||||||||||||||||||
Sbjct: 1 tgacaacgagagagagcacgc 21
