miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 aaggatcctcccatttgcgcccactgggttatgatgcagattcttcatctacttcactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggatcctcccatttgcgcccactgggttatgatgcagattcttcatctacttcactgg 60
Query: 61 agcttccacaagtggtgcaccagatgaaggtctgcatcgtagccgagaggaagcaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcttccacaagtggtgcaccagatgaaggtctgcatcgtagccgagaggaagcaaattc 120
Query: 121 ttctggacc 129
|||||||||
Sbjct: 121 ttctggacc 129
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
|||| ||||||||||||| ||||| |||||||||||||
Sbjct: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 98 tatgatgcagattcttcatct 118
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
|||| ||||||||||||| ||||| |||||||||||||
Sbjct: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 98 tatgatgcagattcttcatct 118
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
|||| ||||||||||||| ||| | |||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatct 54
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
|||| ||||||||||||| ||| | |||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatct 54
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatct 54
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatct 54
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatct 55
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatct 55
>39562_ppt-MIR902i:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 24 ctgggttatgatgcagattcttcatcta 51
|||| |||||||| ||||||||||||||
Sbjct: 25 ctggattatgatgtagattcttcatcta 52
>39561_ppt-MIR902i:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 24 ctgggttatgatgcagattcttcatcta 51
|||| |||||||| ||||||||||||||
Sbjct: 25 ctggattatgatgtagattcttcatcta 52
