miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 244 bits (123), Expect = 1e-65
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 1 gagagaatgctcttttgccttcgctaagatatgatgcagattcttcatctgcgggatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagagaatgctcttttgccttcgctaagatatgatgcagattcttcatctgcgggatatt 60
Query: 61 cttgcgtggtataacagacgaagatctgcatcataaccaagcgggagtaaacattgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgcgtggtataacagacgaagatctgcatcataaccaagcgggagtaaacattgtgct 120
Query: 121 acc 123
|||
Sbjct: 121 acc 123
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 22 cgctaagatatgatgcagattcttcatctgcgggatattcttgcgtggtataacagacga 81
||||| |||||||||||||||||||| ||| | |||| ||||| | |||||||||||||
Sbjct: 97 cgctacgatatgatgcagattcttcacctgtgtgatactcttgag--gtataacagacga 154
Query: 82 agatctgcatcataaccaagcg 103
|| ||||||||||| |||||||
Sbjct: 155 aggtctgcatcatagccaagcg 176
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/82 (87%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 22 cgctaagatatgatgcagattcttcatctgcgggatattcttgcgtggtataacagacga 81
||||| |||||||||||||||||||| ||| | |||| ||||| | |||||||||||||
Sbjct: 97 cgctacgatatgatgcagattcttcacctgtgtgatactcttgag--gtataacagacga 154
Query: 82 agatctgcatcataaccaagcg 103
|| ||||||||||| |||||||
Sbjct: 155 aggtctgcatcatagccaagcg 176
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 71 ataacagacgaagatctgcatcataaccaag 101
||||||||||||| ||||||||||| |||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 98 tatgatgcagattcttcatctg 119
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 71 ataacagacgaagatctgcatcataaccaag 101
||||||||||||| ||||||||||| |||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 98 tatgatgcagattcttcatctg 119
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctg 55
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctg 55
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctg 55
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 34 tatgatgcagattcttcatctg 55
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatctg 56
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatctg 51
||||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatctg 56
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 30 tatgatgcagattcttcatct 50
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
