miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 280 bits (141), Expect = 3e-76
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 ggtagcaggtttgttcattttcttccgctagtctatgatgcagattcttcatctgtttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtagcaggtttgttcattttcttccgctagtctatgatgcagattcttcatctgtttag 60
Query: 61 ctgaatctgcgtcagtgtttcagtgttacagacgaaggtctgcatcatagtcaagaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgaatctgcgtcagtgtttcagtgttacagacgaaggtctgcatcatagtcaagaggaa 120
Query: 121 tgaaaatacattatagattat 141
|||||||||||||||||||||
Sbjct: 121 tgaaaatacattatagattat 141
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 15 tcattttcttccgctagtctatgatgcagattcttcatctgttt 58
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcatttccttccgctagtctatgatgcagattcttcatctgttt 58
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 89 cagacgaaggtctgcatcatagtcaagaggaa 120
||||||||||||||||||||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaa 112
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 15 tcattttcttccgctagtctatgatgcagattcttcatctgttt 58
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcatttccttccgctagtctatgatgcagattcttcatctgttt 58
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 89 cagacgaaggtctgcatcatagtcaagaggaa 120
||||||||||||||||||||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaa 112
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
||||| |||| ||||||||||||||||||||||||||
Sbjct: 86 cttcctctagcctatgatgcagattcttcatctgttt 122
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
||||||||||||||||||||||| |||||||||
Sbjct: 147 acagacgaaggtctgcatcatagccaagaggaa 179
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
||||| |||| ||||||||||||||||||||||||||
Sbjct: 86 cttcctctagcctatgatgcagattcttcatctgttt 122
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
||||||||||||||||||||||| |||||||||
Sbjct: 147 acagacgaaggtctgcatcatagccaagaggaa 179
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 cagacgaaggtctgcatcatagtcaag 115
|||||||||||||||||||||||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctgtttagctgaat 66
|||||||||||||||||||||||| | ||||||
Sbjct: 35 tatgatgcagattcttcatctgttgaactgaat 67
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 89 cagacgaaggtctgcatcatagtcaag 115
|||||||||||||||||||||||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctgtttagctgaat 66
|||||||||||||||||||||||| | ||||||
Sbjct: 35 tatgatgcagattcttcatctgttgaactgaat 67
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 acagacgaaggtctgcatcatagtcaag 115
||||||||||||||||||||||| ||||
Sbjct: 147 acagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 acagacgaaggtctgcatcatagtcaag 115
||||||||||||||||||||||| ||||
Sbjct: 147 acagacgaaggtctgcatcatagccaag 174
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctg 55
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctg 55
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatct 54
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatct 54
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
