miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 71 atgaatctaaac--atatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| || |||||||||| || ||||||| |||||||||| || |||||| ||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||||||||||||||||||| ||| ||||| |||||||| |||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 71 atgaatctaa--acatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||||| |||||||| |||||| ||||||| |||| ||||| ||| ||| | ||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 153 bits (77), Expect = 9e-37
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||| |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 70 aatgaatctaaacatatatgtgtctata--ttcattaacatctatataaatatggacnat 127
|||||||||| |||||||| ||| |||| ||||||||||||||||| | | ||| | ||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
Score = 137 bits (69), Expect = 6e-32
Identities = 134/155 (86%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||||||||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnata 128
||||| ||| ||| ||||| |||||| |||||||| ||||||||| ||| ||| | ||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||||||||||||||||| ||||||||||| |||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagtag 159
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatata----tgtgtctatattcattaacatctatataaatatggacna 126
||||||||| | ||||| ||||| || |||||||||||||||||| ||| ||| | |
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
| ||||||||||||||||| ||||||||||| ||||
Sbjct: 125 tgctagaaagtcttataatatgaaacggagggagta 160
Score = 127 bits (64), Expect = 5e-29
Identities = 133/156 (85%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 71 atgaatct----aaacatatatgtgtctatattcattaacatctatataaatatggacna 126
|||||||| | ||| |||| | | || |||||||||||||||||| ||| ||| | |
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
| ||||||||||||||||| ||||||||||| ||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 137 bits (69), Expect = 6e-32
Identities = 135/155 (87%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 71 a-tgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnat 127
| | |||||| ||| || || | |||| |||||||||||||||||| ||| ||| | ||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||||||||||||||| ||||
Sbjct: 125 gctagaaagtcttataatctgaaacggagggagta 159
Score = 113 bits (57), Expect = 8e-25
Identities = 132/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| ||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 71 atgaatctaaacata--tatgtgtctatattca-ttaacatctatataaatatggacnat 127
||||||||| | ||| || ||||||| ||| | ||||||||||||| ||| ||| ||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | ||||||||||||||||| || | ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 71 atgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||||||| ||||| || |||||||||||||||||| ||| ||||| |
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||| || |||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 71 atgaatctaa--acatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||||| ||| |||| |||||| |||||||||||||||||| ||| | ||| ||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 134/156 (85%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||||| | ||||||||||||||||| |||||||||||| ||||
Sbjct: 160 actactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgt 101
Query: 69 taatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacna 126
|||||||||| | |||||||| |||||| |||||||||||||||||| ||| ||| | |
Sbjct: 100 taatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaa 41
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
|||||||||| |||| | | ||||||||||| ||||
Sbjct: 40 tactagaaagacttacattatgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| |||||||| ||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||||| ||||||||| |||||||||||||||||| |||||| | ||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||||||||||||| | | ||||||||||| |||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 133/155 (85%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 71 atgaatctaaac--atatatgtgtctatattcattaacatctatataaatatggacnata 128
|| |||||| || ||||||||| | | |||||||||||| ||||| ||| ||| | ||
Sbjct: 65 ataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
|||||||||||||||| |||||||||||||||||
Sbjct: 125 ctagaaagtcttataacttgaaacggaggtagtag 159
Score = 113 bits (57), Expect = 8e-25
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 159 ctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtt 100
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnat 127
||||||||| |||||||| |||||| ||| |||||||| ||||| ||| ||| | ||
Sbjct: 99 aatgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
| |||||||||||||| ||||||||||| ||||
Sbjct: 39 gccagaaagtcttataacttgaaacggaggaagta 5
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 71 atgaatctaaacatatat--gtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||||||| ||||||| |||||||||||||||||| ||||||| | ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 114/133 (85%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatctaaacat--atatg 89
||||||||||||| | | ||||||||||||| |||||||||||| || ||| ||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||||||||| ||||||| | |||||||||||||||| | | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtga 145
Query: 150 aacggaggtagta 162
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||| ||| ||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 71 atgaatctaaacatatatg--tgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||||||||| |||||| |||||||||||||||||| ||||||| | ||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||| | | ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 71 atgaatctaaacat--atatgtgtctatattcattaacatctatataaatatggacnata 128
|||||| || ||| |||| |||||| |||||||||||||||||| ||| ||| | |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 127 bits (64), Expect = 5e-29
Identities = 102/114 (89%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgt 90
|||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 91 gt--ctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatat 88
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||| |||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||||||||| ||||| ||| ||||| || ||||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||| ||| ||| |||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||||| || | |||| ||||||||||||||||| ||||||| | |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||| | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||| ||| | |||| || |||||| |||||||||||||||||| ||| ||||| ||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||| ||||||||| | | ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 131/155 (84%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||||||||||| ||||| | ||||||||||||||||| |||| ||||||||| |||
Sbjct: 159 tactacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatg 100
Query: 68 ttaatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnat 127
|||||||||||| ||| || | ||| ||||||||||||| |||| ||||| | | ||
Sbjct: 99 ttaatgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattatgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 129/153 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||||| | |||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
||||||||| |||| ||||||| |||||||||||| ||||| ||| ||||| || ||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 131 agaaagtcttataatctgaaacggaggtagtag 163
||||||||||| | | ||||||||||| |||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagtag 157
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| ||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||| ||| | |||| || |||||| |||||||||||||||||| ||| ||||| ||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||| ||||||||| | | ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||| ||| ||| |||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||||| || | |||| ||||||||||||||||| ||||||| | |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| ||| |||| |||||||| |||||||||||||||||| ||| || | ||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||| ||||||||| | | ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||| ||||||| || ||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||| | ||| | |||| |||||||||||||||||| ||| ||| | ||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 113 bits (57), Expect = 8e-25
Identities = 128/152 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||| ||||||| |||||||| || ||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
||||||||| |||||| |||||||| |||||||||||||||||| ||| ||| | || ||
Sbjct: 96 atgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgct 37
Query: 131 agaaagtcttataatctgaaacggaggtagta 162
|||||| |||| | | ||||||||||| ||||
Sbjct: 36 agaaagacttacattatgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| |||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
||||||||| ||| | || |||||| ||||||||||||||| || ||||| | || ||
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 131 agaaagtcttataatctgaaacggaggtagta 162
| ||||||||| | | ||||||||||| ||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 111 bits (56), Expect = 3e-24
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacat--atat 88
|||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 103 bits (52), Expect = 8e-22
Identities = 99/114 (86%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatg- 89
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 90 -tgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|| ||| |||||||||||| ||||| ||||||| | || ||||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| ||| |||| |||||||| |||||||||||||||||| ||| || ||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||| ||||||||| | | ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||| ||||||| || ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||| | ||| | |||| |||||||||||||||||| ||| ||| | ||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 111 bits (56), Expect = 3e-24
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatat 88
|||||||||||||||||| ||| |||||||||||||||||||||||| | | ||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
||| ||| |||||||||||||||||| ||| ||| | || ||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 95.6 bits (48), Expect = 2e-19
Identities = 98/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 31 ataagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatat 88
|||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
| |||| |||||||||||| ||||| ||| ||| | || ||||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| |||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 73 aatgaatctagacatatat 55
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
Score = 77.8 bits (39), Expect = 4e-14
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 82 catatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtctta 141
||||||| |||||| |||||||||||| ||||| ||| ||| || |||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtctta 111
Query: 142 taatctgaaacggaggtagtag 163
|||| ||||||||||| |||||
Sbjct: 112 taatttgaaacggagggagtag 133
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 126 atactagaaagtcttataatctgaaacggaggtagta 162
|||||||||||||||||||| ||||||||||| ||||
Sbjct: 41 atactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 131/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| ||| | | ||||||||||||||||| ||| || |||||| ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgt 62
Query: 69 taatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatggacna 126
|||||||||||| ||||| || |||||| |||||||| |||||| || ||| ||| | |
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaa 122
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
| ||||||||||||| | | ||||||||||| ||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||||||| ||| |||||| || ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||||| ||||||| || |||||||||||| ||||| || ||| | ||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||||||||||||| | | ||||||||||| |||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 118 ttactacttcctccgtttcatattataagactttctagcattacccatattcatatagat 59
Query: 67 gttaatgaat 76
| ||||||||
Sbjct: 58 gataatgaat 49
Score = 71.9 bits (36), Expect = 3e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||| ||||||||| ||||||| || ||||||||||||||||| ||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 157 gtagtag 163
| |||||
Sbjct: 109 gaagtag 115
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| |||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacatt 42
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 130 tagaaagtcttataatctgaaacggaggtagta 162
|||||||||||||||| ||||||||||| ||||
Sbjct: 37 tagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||| | | ||||||||| ||||||| |||||||||| || |||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 70 aatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnat 127
|||||||||| ||||| ||||||| || |||||||||| ||||||| ||||| | ||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||||||| ||||| |||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 71 atgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacnata 128
||||||||||||| ||| | |||||| ||||||||||||||| || ||||||| | ||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||| ||||||||| | | ||||||||||| |||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagtag 159
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 71 atgaatcta 79
|||||||||
Sbjct: 75 atgaatcta 67
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 3 actacttcctccgtttcttattataagactttctagcattacccacattcatatatatgt 62
Query: 69 t 69
|
Sbjct: 63 t 63
Score = 75.8 bits (38), Expect = 2e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||| ||||| ||| ||||| || ||||||||||||||||| |||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 150 aacggaggtagta 162
||| |||| ||||
Sbjct: 123 aacagaggaagta 135
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 92/104 (88%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | ||||||||||||||||| ||| |||||| || ||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 71 atgaatctaa--acatatatgtgtctatattcattaacatctat 112
|||||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctat 108
Score = 60.0 bits (30), Expect = 1e-08
Identities = 83/100 (83%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 65 atgttaatgaatctaaacatatat--gtgtctatattcattaacatctatataaatatgg 122
||||||||||||||| |||||||| |||| || ||||||||||||||| || ||| |||
Sbjct: 104 atgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgg 45
Query: 123 acnatactagaaagtcttataatctgaaacggaggtagta 162
|| |||||||||||| | | ||||||||||| ||||
Sbjct: 44 gtaatgctagaaagtcttgcattatgaaacggaggaagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||||||||||||||||| ||| |||||| || |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||| | || | | || |||||||||||||||||| |||||||| ||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||||||| ||||||| |||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatctatataaatatggacnata 128
||||||||||| |||| | |||||| ||||||||||| ||| || ||| ||| ||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | ||||||||||||||||| |||||||||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||||| ||||| | || ||||||||||||| |||| | ||| | |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||| ||| ||| | ||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 71 atgaatctaaa--catatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||||| |||| || |||||| ||||||||||||||| || ||||||| | ||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||||||| || ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| | | |||||||||||| |||||||| ||||||| | ||| ||| | ||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagtagaa 165
||||||||||||| | | ||||||||||| |||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtagaa 2
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | ||||||||||||||||| ||| ||||| ||| ||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnat 127
||||||||| | ||||||| || | || |||||||||||||||||| ||| || | ||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 125/150 (83%)
Strand = Plus / Plus
Query: 14 ttcctccgtatcatattataagactttctagcattatccatattcatatatatgttaatg 73
||||||||| ||||| |||||| | |||||||||| ||| ||||||||| |||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 74 aatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatactaga 133
||||| ||||||||||| ||| |||||||| ||||||| ||| ||| | || |||||
Sbjct: 68 aatctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 134 aagtcttataatctgaaacggaggtagtag 163
| | |||||| | ||||||||||| |||||
Sbjct: 128 atgacttatattgtgaaacggagggagtag 157
Score = 65.9 bits (33), Expect = 2e-10
Identities = 119/148 (80%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | |||||| | |||||| ||| ||| |||| |||| || |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatac 129
|||||||||| || |||| |||| | |||||||||||||||||| ||| ||| | || |
Sbjct: 97 aatgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgc 38
Query: 130 tagaaagtcttataatctgaaacggagg 157
||||| | |||||| | |||||||||||
Sbjct: 37 tagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 66 atgaatctagacat 53
Score = 83.8 bits (42), Expect = 7e-16
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||||||||| ||| ||| | || ||||||||||||||||| |||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatga 113
Query: 150 aacggaggtagta 162
|||||||| ||||
Sbjct: 114 aacggaggaagta 126
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||| ||||||||| ||||||||||| ||||
Sbjct: 38 ctagaaaatcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 atgaatctaaaca 83
|||||||||||||
Sbjct: 72 atgaatctaaaca 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
||||| || |||||||||||||||||| ||| ||| | || ||||||||||||||||| |
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 148 gaaacggaggtagta 162
||||| |||| ||||
Sbjct: 118 gaaactgaggaagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcatt 48
|||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1 ttactactccctccgtttcatattataagactttctagcatt 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||||||||||||||||| ||||||||||| |||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 2 tactactccctccgtttcatattataagactttctagcattgcccacattcatatatacg 61
Query: 68 ttaatgaatctaaacat 84
|||||||||||| ||||
Sbjct: 62 ttaatgaatctagacat 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||| | ||||| ||| ||| | || ||||||||||||||||| |||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 150 aacggaggtagtag 163
|||||||| |||||
Sbjct: 17 aacggagggagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatat 56
|||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattgtccatat 83
Score = 54.0 bits (27), Expect = 6e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 117 atatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct: 83 atatggacaatgctagaaagtcttataatatgaaaaggaggaagta 128
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 71 atgaatctaaaca 83
|||||||||||||
Sbjct: 72 atgaatctaaaca 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
||||| || |||||||||||||||||| ||| ||| | || ||||||||||||||||| |
Sbjct: 58 tgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatat 117
Query: 148 gaaacggaggtagta 162
||||| |||| ||||
Sbjct: 118 gaaactgaggaagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcatt 48
|||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1 ttactactccctccgtttcatattataagactttctagcatt 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||||||||||||||||| ||||||||||| |||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 131 tactactccctccgtttcatattataagactttctagcattgcccacattcatatatacg 72
Query: 68 ttaatgaatctaaacat 84
|||||||||||| ||||
Sbjct: 71 ttaatgaatctagacat 55
Score = 69.9 bits (35), Expect = 1e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||| | ||||| ||| ||| | || ||||||||||||||||| |||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 150 aacggaggtagtag 163
|||||||| |||||
Sbjct: 116 aacggagggagtag 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatat 56
|||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattgtccatat 50
Score = 54.0 bits (27), Expect = 6e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 117 atatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct: 50 atatggacaatgctagaaagtcttataatatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 71 atgaatcta--aacatatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| ||| |||| |||||| |||||||| |||||||||||| ||| | |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | |||||| |||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||| | |||||||||||||| || ||| ||| ||||| || ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 71 atgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacnata 128
||||||||| |||||||||||| ||| |||||||| ||| ||||| ||| ||| | ||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/156 (82%), Gaps = 9/156 (5%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| |||||||||||||||| | || ||| ||||||||| ||||||
Sbjct: 155 tacttcctccgtttcatattataagacttaattgc-----ccacattcatatagatgtta 101
Query: 71 atgaatctaaaca----tatatgtgtctatattcattaacatctatataaatatggacna 126
||||||||| ||| ||| ||||| || |||||||||||||||||| ||| ||| | |
Sbjct: 100 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtgggcaa 41
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
| ||||||||||||||||| |||||| |||| ||||
Sbjct: 40 ttctagaaagtcttataatatgaaacagagggagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/156 (82%), Gaps = 9/156 (5%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| |||| || ||||||||||||||||||||| ||| ||| ||||||||| ||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 71 atgaatct----aaacatatatgtgtctatattcattaacatctatataaatatggacna 126
|||||||| | |||||| ||||| || |||||||||||||||||| ||| ||| | |
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 127 tactagaaagtcttataatctgaaacggaggtagta 162
| |||||||||||| ||||||||||| ||||
Sbjct: 125 t-----taagtcttataatatgaaacggaggaagta 155
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 7e-19
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatctaaacata--tatg 89
|||||||||||||||||| ||| |||||| || ||||||||||||||||||||| ||||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 90 tgtctatattcattaacatctatata 115
||| || |||||||||||| ||||||
Sbjct: 86 tgtttagattcattaacatatatata 111
Score = 63.9 bits (32), Expect = 7e-10
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 59 atatatatgttaatgaatctaa--acatatatgtgtctatattcattaacatctatataa 116
|||||||||||||||||||||| ||||| || ||| || ||||||||||||||| || |
Sbjct: 110 atatatatgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatga 51
Query: 117 atatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|| ||| || ||||||||||||| | | |||||| |||| ||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||||||||||||||||||||| |||||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 69.9 bits (35), Expect = 1e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 81 acatatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtctt 140
|||||||| |||||| ||||||||||||||| || ||| |||| || ||||||||||||
Sbjct: 86 acatatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtctt 27
Query: 141 ataatctgaaacggaggtagta 162
| | | ||||||||||| ||||
Sbjct: 26 acattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||||||||||| |||| |||| || ||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 71 atgaatcta--aacatatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| |||||| || | |||| ||||||||| ||||| |||||| ||||| ||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
||| ||||||||| | | ||||||||||| |||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagtag 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 131/158 (82%), Gaps = 4/158 (2%)
Strand = Plus / Minus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||||||||||| ||| | | ||||||||| ||||||| |||| ||| || || ||
Sbjct: 160 ttactacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagat 101
Query: 67 gttaatgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggac 124
|||||||||||| | ||| ||||| |||| |||||||||||||||||| || |||||
Sbjct: 100 attaatgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggac 43
Query: 125 natactagaaagtcttataatctgaaacggaggtagta 162
|| |||||||||||| | | ||||||||||| ||||
Sbjct: 42 aatggtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat--g 89
|||||||||||||||| | || ||||||||| |||| |||||||||| |||||||| |
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatg 54
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 141
|||||| |||||||||||||||||| ||| ||| || |||||||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatct--aaacatatatg 89
|||||||||||||||| | ||| ||||||||| |||||||||||||| | ||||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 90 tgtctatattcattaacatctatat 114
|||||| ||||||| ||||||||||
Sbjct: 62 tgtctagattcatttacatctatat 86
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| |||||||||||||||||||| ||||||||||||| ||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 71 atgaatcta 79
|||||||||
Sbjct: 80 atgaatcta 72
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
|||||||||||| || ||||| |||||| |||||||||||| |||||||||||| |||
Sbjct: 2 tactacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatg 61
Query: 68 ttaatgaatcta 79
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 92 tctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaa 151
|||| |||||||| ||||||||| ||||||| || ||||||||||||||| | |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 152 cggaggtagta 162
|||||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatcta 79
| |||||||
Sbjct: 65 acgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||| ||||||||||||| ||| ||| | || ||||||||||||||||| ||||||||||
Sbjct: 70 attcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggag 11
Query: 157 gtagta 162
| ||||
Sbjct: 10 gaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||||||||| ||||||||||
Sbjct: 101 ctagaaagtcttataatctgaaatggaggtagta 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatat 64
|||| ||||| | ||| ||||||||||||||||||||| ||| ||||||||||
Sbjct: 134 tactacctccatttcagattataagactttctagcattgcccacattcatatat 81
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | |||||||||||||||||||| ||| || |||||| |||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 70 aatgaatctaaacatat 86
|||||||||||||||||
Sbjct: 77 aatgaatctaaacatat 61
Score = 61.9 bits (31), Expect = 3e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||||||||||||| || ||| || ||||||||||||||| | ||||||||||
Sbjct: 71 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 130
Query: 157 gtagtagaaa 166
| ||||||||
Sbjct: 131 ggagtagaaa 140
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | |||||||||||||||||||| ||| || |||||| |||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 70 aatgaatctaaacatat 86
|||||||||||||||||
Sbjct: 64 aatgaatctaaacatat 80
Score = 61.9 bits (31), Expect = 3e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||||||||||||| || ||| || ||||||||||||||| | ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacggag 11
Query: 157 gtagtagaaa 166
| ||||||||
Sbjct: 10 ggagtagaaa 1
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||||||||||||||||||| || ||||||||||||| | | |||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatga 124
Query: 150 aacggag 156
|||||||
Sbjct: 125 aacggag 131
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 17 ctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaat 76
|||||| ||||| | ||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 131 ctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatgaat 72
Query: 77 ctaaacata 85
||| |||||
Sbjct: 71 ctagacata 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 103 taacatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||||||||||| ||| | || ||||||||||||| | | |||||||||| ||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Query: 163 gaaa 166
||||
Sbjct: 4 gaaa 1
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 89/103 (86%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | ||||||||||||||||| || || |||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatcta 111
||||||||||||| || || ||||||||||||||||||||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatcta 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 90/110 (81%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaacatatat--gtgtctatattcattaacatctat 112
|||||| || |||||||||||| || |||||| | |||| || ||||||||||||||||
Sbjct: 49 attcatttagatgttaatgaatatagacatatgtacgtgtttagattcattaacatctat 108
Query: 113 ataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|| || || | || ||||||||||||| | | ||||||||||| ||||
Sbjct: 109 atgtatgtgagcaatgctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 130/158 (82%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | ||||||||||| ||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | ||| || | | |||| |||||||||||||||||| || ||| | ||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagtagaaa 166
|||||| | |||| | | ||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtagaaa 1
Score = 81.8 bits (41), Expect = 3e-15
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||||| ||| || |||||| |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 70 aatgaatctaaacat--atatgtgtctatattcattaacatctatataaatatggacnat 127
||||||| || | || || |||||||| |||||||||||||||||| ||||||| ||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||| | | ||||||||||| ||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | ||||||||| |||||||| ||| ||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 71 atgaatctaaacatata--tgtgtctatattcattaacatctatataaatatggacnata 128
|| |||||| | ||||| |||||| |||||||| ||||||||| ||| ||| | ||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||||||||| | | ||||||||||| ||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | |||||||||||| |||| ||| ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 98 atgaatctagacat 85
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| |||| || ||||| | ||||||||| ||||||| ||| ||||||||| || | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 71 atgaatctaaacatatat--gtgtctatattcattaacatctatataaatatggacnata 128
|||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||| | |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | |||||| |||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||| | |||||||||||||| || ||| ||||||||||||||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | ||| |||| ||| || ||||||| | |||||||| ||| ||| | ||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||| ||||||||| | | |||||| |||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
|||||||||||| ||||||||||||||||||||||||| |||| ||||||||| |||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||||||||||||||||||||||| |||| ||||| ||| ||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 71 atgaatcta 79
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| ||| |||||||||||| | ||| ||||| || ||||||||||||||||| |
Sbjct: 79 tgtgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatat 20
Query: 148 gaaacggaggtagta 162
|||||||||| ||||
Sbjct: 19 gaaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 104 aacatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||||| ||| ||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatata 65
|||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 105 tacttcctccgtctcataatataagactttctagcattgtccatattcatatata 51
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| | ||| |||||||||||||||||||
Sbjct: 5 tacttcctccgttttataatataagactttctagcatt 42
Score = 52.0 bits (26), Expect = 3e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 110 tatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||| ||||||||| || ||||||||||||||| | ||| ||||||| ||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||| | | ||||||||| || |||| ||| ||||| ||| ||||
Sbjct: 160 actactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgt 101
Query: 69 taatgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacna 126
||||||||||| | |||||||||| ||| |||||||||||||||||| ||| || | |
Sbjct: 100 taatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 41
Query: 127 tactagaaagtcttataatctgaaacggaggtagtag 163
| |||| |||||||| | | ||||||||||| |||||
Sbjct: 40 tgctaggaagtcttacattgtgaaacggagggagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 128/158 (81%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||| | | |||||||| |||||||| || ||||||||| |||
Sbjct: 2 tactactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatg 61
Query: 68 ttaatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacn 125
||||||||||| | ||| |||| | |||| |||||||||||||||| | ||| ||| |
Sbjct: 62 ttaatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggca 121
Query: 126 atactagaaagtcttataatctgaaacggaggtagtag 163
|| || ||||||||| | | ||||||||||| |||||
Sbjct: 122 atgttaaaaagtcttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| |||||||||||||||||||| |||| ||| ||||||||| ||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 78 atgaatctagacatatat 61
Score = 73.8 bits (37), Expect = 7e-13
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||| |||||||| ||||||||| ||| ||| | || |||||||||||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 143 aatctgaaacggaggtagta 162
||| ||||||||||| ||||
Sbjct: 119 aatatgaaacggagggagta 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||||||| | ||||||||||||| ||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgttttatattataagactatctagtattgcccacattcatatatat 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 110 tatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||| ||| ||| | |||||||| ||||||||||| | ||||||||| ||||
Sbjct: 57 tatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| |||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaaacatata 87
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
Score = 60.0 bits (30), Expect = 1e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||||||||| ||| ||| | || |||||||| |||| | | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 150 aacggaggtagta 162
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
|||||||||||| |||||||||||||||||||||||||||||| ||| |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatata 63
||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2 tactactccctccgtttcatattataagactttatagcattatccacattcatata 57
Score = 60.0 bits (30), Expect = 1e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 110 tatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||| |||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 108 tctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagtag 163
||||||| ||| |||| || ||| ||||||||||||| ||||||||||| |||||
Sbjct: 59 tctatatgaatgtggataatgctataaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 127/155 (81%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||| | |||||| | || ||||||| ||| |||||||| ||||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnat 127
||||||||| | | |||||| |||||| |||||||| |||| |||||||| || | ||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 128 actagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||||| | ||||||||||| ||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | |||||| | |||||||||| | || ||| |||| ||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 98 atgaatctagacatatat 81
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | |||||||||||||||||| ||||||||||||| ||||||| |||
Sbjct: 10 cctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacgaa 69
Query: 76 tcta 79
||||
Sbjct: 70 tcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| |||| ||||||||||||| ||||||| || ||||||||||||| | | |
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattat 20
Query: 148 gaaacggagg 157
||||||||||
Sbjct: 19 gaaacggagg 10
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| ||| |||||||| ||||||||||||||| |||||||| |||||| ||
Sbjct: 128 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatgtctacat 69
Query: 99 tcattaacatctatat 114
||||||||||| ||||
Sbjct: 68 tcattaacatcaatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| || | |||||||| |||||||||||| || |||||||| |||||| ||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtagacatatatatgtctagat 92
Query: 99 tcattaacatctatat 114
||||||||||| ||||
Sbjct: 93 tcattaacatcaatat 108
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||| | | | ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnata 128
||| ||||| ||| || ||||||||| ||||||| |||||||| | || ||| | ||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||| | |||| |||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaagcggaggaagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | |||| || |||| || || ||||||||||||||| ||| | || |
Sbjct: 98 atgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtg 39
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 126/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | ||||||||| ||| |||| | |||||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||||||||| ||| |||||| ||| ||||||||||| || || ||| | ||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 56.0 bits (28), Expect = 2e-07
Identities = 85/103 (82%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||||||||||||||| ||| || ||| || ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 71 atgaatctaaacatat--atgtgtctatattcattaacatcta 111
|| |||||| |||||| || ||| || |||||||||||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatcta 56
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcat 60
||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattgcccatattcat 65
Score = 75.8 bits (38), Expect = 2e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 95 atattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacgg 154
|||||||||| ||| ||||| ||| ||||| |||||||||||||||||| | ||||||||
Sbjct: 72 atattcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacgg 13
Query: 155 aggtagtag 163
||| |||||
Sbjct: 12 agggagtag 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||||| ||||||||||||||| ||| |||| ||||||||| ||| |
Sbjct: 4 ctactccctccgtttcatactataagactttctagtattgtccacattcatataaatgct 63
Query: 70 aatgaat 76
|||||||
Sbjct: 64 aatgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 116 aatatggacnatactagaaagtcttataatctgaaacggaggtagtag 163
||||||| | || ||||||||||||||||| ||||||||||| |||||
Sbjct: 68 aatatgggcaatgctagaaagtcttataatatgaaacggaggaagtag 115
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||||||||||| ||| | | |||| | |||||||||| ||| |||||||| |||
Sbjct: 161 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 102
Query: 68 ttaatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacn 125
||||||||||| | | |||||| ||| || ||||||||||||| |||| ||||||||
Sbjct: 101 ttaatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaa 42
Query: 126 atactagaaagtcttataatctgaaacggaggtagta 162
|| |||||| | |||| | | ||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 105/127 (82%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 96
|||||||||| ||||||||||||| ||||||||||||||| || |||||| | ||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| ||| ||| || |||||| | |||| | | ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 157 gtagtag 163
| |||||
Sbjct: 153 gaagtag 159
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 77.8 bits (39), Expect = 4e-14
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | |||||| | || ||||||| |||||||||||| ||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatc 109
||||||||| |||||||| | |||| |||||||||||||
Sbjct: 89 atgaatctagacatatatctatctagattcattaacatc 51
Score = 61.9 bits (31), Expect = 3e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 65 atgttaatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggac 124
||||||||||||||| | | |||| |||||| ||||||||||||| |||| |||||||
Sbjct: 52 atgttaatgaatctagatagatatatgtctagattcattaacatcaatatgaatatggga 111
Query: 125 natactagaaagtcttataatctgaaacggaggtagta 162
|| ||| || | |||||| | ||||||||||| ||||
Sbjct: 112 aatgctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 77.8 bits (39), Expect = 4e-14
Identities = 125/153 (81%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | ||||||||||| ||||| || ||| || |||| | |||||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 70 aatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatac 129
||||||||||| ||| || |||||| ||||||||||||||| || ||| ||| | | |
Sbjct: 95 aatgaatctaa--atacatatgtctagattcattaacatctaaatgaatgtgggcaacgc 38
Query: 130 tagaaagtcttataatctgaaacggaggtagta 162
|| ||||||||| | | ||||||||||| ||||
Sbjct: 37 tacaaagtcttacattgtgaaacggaggaagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | ||||||||| |||| || ||| |||||| || ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
||||||||| || |||||| | || |||||||||||||| ||| || ||| | ||
Sbjct: 65 atgaatctagac--atatgtatttagattcattaacatctttatgtatgtgggtagtgct 122
Query: 131 agaaagtcttataatctgaaacggaggtagtaga 164
| ||||||||||| | ||||||||||| ||||||
Sbjct: 123 aaaaagtcttatattgtgaaacggagggagtaga 156
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||||||| || ||||||||||||||||||| || ||| | || |||||||||||||
Sbjct: 55 atatatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttat 114
Query: 143 aatctgaaacggaggtagtag 163
| | | |||||||||||||||
Sbjct: 115 attgtaaaacggaggtagtag 135
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 30 tataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
|||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatat 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcatt 48
||||||| ||||| |||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagcatt 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 45/53 (84%)
Strand = Plus / Minus
Query: 105 acatctatataaatatggacnatactagaaagtcttataatctgaaacggagg 157
|||| |||||| || ||| | || ||||||||||||||| | |||||||||||
Sbjct: 62 acatatatatagatgtgggcaatgctagaaagtcttatattatgaaacggagg 10
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| |||| || ||||| | ||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 71 atgaatctaaacat 84
||||||||| ||||
Sbjct: 72 atgaatctagacat 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| |||||||||||||||||| ||| ||||| || ||||||||||||| | | |||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatga 119
Query: 150 aacggaggtagta 162
||| |||| ||||
Sbjct: 120 aacagagggagta 132
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatagatgt 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 acatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||||| ||| ||||| || ||||||||||||| | | ||||| ||||| ||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| ||| | | ||||||||||||||||| ||| ||||||||| ||||
Sbjct: 136 actacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgt 77
Query: 69 taatgaatctaaacatat 86
|||| |||||| ||||||
Sbjct: 76 taataaatctagacatat 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| ||| |||||||||||||| ||| ||| | || ||||||||||||| | | |||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 150 aacggaggtagtag 163
|||||||| |||||
Sbjct: 122 aacggaggaagtag 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
|||| ||||||| ||||||| ||||||||||||||||| | || |||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatata 57
Score = 50.1 bits (25), Expect = 1e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 107 atctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||| ||| || || || ||||||||||||| ||| ||||||||||| ||||
Sbjct: 60 atctatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| |||||| | ||||| |||| |||| |||||||| |||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 70 aatgaatctaaacatata 87
|||||||||| |||||||
Sbjct: 80 aatgaatctagacatata 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| ||||||||||||| |||| ||| |||| || ||||| | |||||| | |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatga 126
Query: 150 aacggaggtagtagaa 165
|||||||| |||||||
Sbjct: 127 aacggaggaagtagaa 142
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| ||| |||||||||||||| ||| ||||| || ||||||||||||| | | |
Sbjct: 66 tgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgt 125
Query: 148 gaaacggaggtagtag 163
|||||||||| |||||
Sbjct: 126 gaaacggagggagtag 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | ||||||||||||||||| |||| ||||||||| |||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 70 aatgaatcta 79
||| ||||||
Sbjct: 81 aataaatcta 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||| ||||||| ||| | | ||||||||| |||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 acatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||||| |||||||| || ||| ||||||||| | | ||||||||||| ||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 71 atgaatcta 79
|||||||||
Sbjct: 80 atgaatcta 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 87 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatc 146
|||||| || |||||||||||||||||| ||| ||| | || ||||||||||||| | |
Sbjct: 65 atgtgtatagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacatta 124
Query: 147 tgaaacggaggtagta 162
||||||||||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||| ||||| ||||| | ||||||||||||||||| | | ||||||||| ||||||
Sbjct: 5 tacttcttccgtttcataatgtaagactttctagcattgcctacattcatatagatgtta 64
Query: 71 atg 73
|||
Sbjct: 65 atg 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| |||||||||||||||||| ||| ||| | || ||||||||||||| | | |
Sbjct: 79 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattat 20
Query: 148 gaaacggaggtagta 162
|||||||||| ||||
Sbjct: 19 gaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||| ||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
Score = 46.1 bits (23), Expect = 2e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 105 acatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||||| ||| ||| | || ||||||||||||| | | ||||||||||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | ||||||||||||||||| |||| ||||||||| ||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 76 tcta 79
||||
Sbjct: 43 tcta 40
Score = 69.9 bits (35), Expect = 1e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| |||| ||||||||||||| ||| ||||| || ||||||||||||| | | |
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattat 93
Query: 148 gaaacggagg 157
||||||||||
Sbjct: 94 gaaacggagg 103
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||||||||||| ||| | | |||| | || ||||||| ||| |||||| || ||
Sbjct: 1 ttactacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagat 60
Query: 67 gttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
||||||||||| | |||||||| || || ||||||||||||||||||
Sbjct: 61 gttaatgaatcaagacatatatatgcatagattcattaacatctatat 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 42 tagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattca 101
||||||| | || ||||||||| ||||||||||||||| ||||||| ||||| |||||
Sbjct: 125 tagcatttttcacattcatatagatgttaatgaatctatgcatatatatgtcttgattca 66
Query: 102 ttaacatcta 111
||||||||||
Sbjct: 65 ttaacatcta 56
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 95/114 (83%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 52 catattcatatatatgttaatgaatctaaacat--atatgtgtctatattcattaacatc 109
||||||||||| ||| |||||||||||||||| |||| | |||| |||||||| ||||
Sbjct: 117 catattcatattgatgctaatgaatctaaacatatatatctatctaaattcattagcatc 58
Query: 110 tatataaatatggacnatactagaaagtcttataatctgaaacggaggtagtag 163
|||| |||||||| ||||||||| | |||||| | || |||||||| |||||
Sbjct: 57 aatatgaatatggaaaatactagaatgacttatactgtggaacggaggaagtag 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| || | |||||| | |||||| ||| ||||||||||||| |||
Sbjct: 3 actacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgc 62
Query: 69 taatgaat 76
||||||||
Sbjct: 63 taatgaat 70
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 125/154 (81%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | ||||||||||| | | ||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | ||| || | | |||| ||||||||||||||||||| || ||| | ||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||| | | ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| | |||||||||| ||| || ||||| ||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 71 atgaatctaaacatatatgtgt--ctatattcattaacatctatat 114
|||||| || | ||| |||||| ||| ||||||||||||||||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatat 53
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 104/126 (82%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgt--gtctat 96
|||||||||| |||| ||||||||| ||| ||||||||||| ||||||| | |||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| ||| |||| || |||||| | |||| | | ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 157 gtagta 162
| ||||
Sbjct: 153 ggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 83/98 (84%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 96
|||||||||| |||| |||||||| ||||||||||||||| || |||||| || |||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 97 attcattaacatctatataaatatggacnatactagaa 134
|||||||| ||||||||| ||| ||||| || ||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaa 33
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| ||||| | |||| | ||||||| ||| |||||| |||||| ||||
Sbjct: 3 actacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgt 62
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 61.9 bits (31), Expect = 3e-09
Identities = 88/106 (83%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | || ||||||| ||| ||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 71 atgaatctaaacata--tatgtgtctatattcattaacatctatat 114
||||||||||||||| | | | |||| ||||||||||||||||||
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatat 53
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 41 ctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatattc 100
|||||||| ||| |||||||||||||||||||||||| | |||||| |||||| ||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatct--agatatatatgtctagattc 33
Query: 101 attaacatctatat 114
|||||||| |||||
Sbjct: 32 attaacatatatat 19
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
||||||||||||||||||||||||| ||||||| | |||| |||||||||||| |||||
Sbjct: 15 attcatatatatgttaatgaatctagacatata--tatctagattcattaacatatatat 72
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/78 (87%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 96
|||||||||| ||| ||||||||| ||||| ||||||||||| |||||| ||||||
Sbjct: 130 ttctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtctag 71
Query: 97 attcattaacatctatat 114
||||||||||||||||||
Sbjct: 70 attcattaacatctatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 89/110 (80%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 112
||||||||| ||||||||||||||| ||| ||||| | | || |||||| |||||||||
Sbjct: 49 attcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatctat 108
Query: 113 ataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|| ||| ||| || |||||| | |||| | | ||||||||||| ||||
Sbjct: 109 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| ||||||||||||||||| | |||| ||||||||| ||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 71 atgaatc 77
|||||||
Sbjct: 79 atgaatc 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||||||||||||| ||| ||||| | ||||||||||||||| |||||||||||
Sbjct: 74 attcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacggag 133
Query: 157 gtagta 162
| ||||
Sbjct: 134 gaagta 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 106 catctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||| ||||||||| | |||||||||||||||| |||||||||||| ||||
Sbjct: 61 catctatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
|||| ||||||| ||| |||||||||||||||||| | ||||||||||||||
Sbjct: 5 tactccctccgtttcaggttataagactttctagcactgtccatattcatata 57
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 67.9 bits (34), Expect = 4e-11
Identities = 103/125 (82%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgt-ctata 97
|||||||||| ||| |||||||| |||||||||||||||||||||| | ||| ||| |
Sbjct: 129 ttctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtgctaga 70
Query: 98 ttcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggagg 157
|||||||||||| |||| ||| ||| || |||||| | |||| | | |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 158 tagta 162
||||
Sbjct: 9 aagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 123/153 (80%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatcta-aacatatatgtgtctatattcattaacatctatataaatatggacnatac 129
||||||||| ||||| || ||| || ||||||||||||| |||| ||| ||| || |
Sbjct: 65 atgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatgc 124
Query: 130 tagaaagtcttataatctgaaacggaggtagta 162
||||| | |||| | | ||||||||||| ||||
Sbjct: 125 tagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||||| |||| |||||||| |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 67.9 bits (34), Expect = 4e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 91
|||||||||||| |||| ||| ||||||||| ||| |||||||||| |||||||||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 92 t--ctatattcattaacatctatataaatatggacnatactagaaagtctta 141
| ||| |||||||| ||| |||| ||| ||| | || |||||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 93/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatcta--aacatatatg 89
||||||||||||||||| ||| |||||||| |||| ||||||||||| ||| ||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtctta 141
|||||| ||||||| ||||||||| ||| ||| | || ||||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||||| |||| |||||||| |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||||| |||||| ||||| ||||||||||| |||| | | ||||||||||
Sbjct: 53 attcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacggag 112
Query: 157 g 157
|
Sbjct: 113 g 113
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||||||||||| ||| | | |||| | |||||||||| ||||||||||||| ||
Sbjct: 1 ttactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 60
Query: 67 gttaatgaat 76
||||||||||
Sbjct: 61 gttaatgaat 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| |||||||| || |||||| | |||| | | ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 157 gtagtag 163
| |||||
Sbjct: 10 gaagtag 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 17 ctccgtatcatattataagactttctagcattatccatattcatat 62
|||||| ||||| | |||| | |||||||||| |||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatat 78
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 67.9 bits (34), Expect = 4e-11
Identities = 122/153 (79%), Gaps = 9/153 (5%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||||||||||||||||| ||| || |||||| ||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
||||||||| ||||||| ||||||||||||||| | ||| || | || ||
Sbjct: 87 atgaatcta---------gtgtctagattcattaacatctaagtgaatgtgagcaatgct 37
Query: 131 agaaagtcttataatctgaaacggaggtagtag 163
||||||||||| | | ||||||||||| |||||
Sbjct: 36 agaaagtcttacattgtgaaacggaggaagtag 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 122/154 (79%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||||||||||| ||| | | ||||||||||||||||| || ||||| || ||||
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgt 62
Query: 69 taatgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||||| ||| ||| |||||||||||||||||| || ||| | ||
Sbjct: 63 taatgaatctagaca---------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||| | | ||||||||||| ||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcatt 50
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 54 ctagaaagtcttataatatgaaacggaggaagta 87
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||||||||||||| ||||||| |||| ||||
Sbjct: 38 ctagaaagtcttataacctgaaacagagggagta 5
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||||| |||||||||||||||||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcatt 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
|||| ||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| ||||||||||| ||||
Sbjct: 71 ctagaaagtcttataatatgaaacggaggaagta 104
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 126/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||| | || |||||||| |||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 70 aatgaatctaaacatatatgt--gtctatattcattaacatctatataaatatggacnat 127
|||||||||| | |||| | | ||||| |||||||||||||||||| ||||| | | ||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 128 actagaaagtcttataatctgaaacggaggtagtag 163
|||||| | |||| | | ||||||||||| |||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagtag 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||||| | |||| | |||||||||| | ||||||||||| ||||
Sbjct: 3 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 62
Query: 69 taatgaatctaaacata 85
||||||||||| |||||
Sbjct: 63 taatgaatctagacata 79
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacat--atatgtgtctat 96
|||||||||| |||| ||||||||| ||| |||||||| ||||||| ||||| || ||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtatag 71
Query: 97 attcattaacatctatataaatat 120
|||||||| ||||||||| |||||
Sbjct: 70 attcattagcatctatatgaatat 47
Score = 63.9 bits (32), Expect = 7e-10
Identities = 103/126 (81%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 96
||||| |||| || ||||||||||| ||| ||||||||||| || |||||| ||| ||
Sbjct: 33 ttctaacattttctatattcatatagatgctaatgaatctatacgcatatatatgtttaa 92
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||| ||||||||| ||| |||| || |||||| | |||| | | ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaatgacttacattgtgaaacggag 152
Query: 157 gtagta 162
| ||||
Sbjct: 153 ggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 125/155 (80%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| |||| |||| ||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnata 128
|||| |||| | | ||||| |||||| |||||||| |||| |||| ||||| || ||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
|||||| | |||||| | ||||||||||| |||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtag 159
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||| | |||||| | |||||||||| || |||||||||| |||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 69 taatgaatctaaacatatat 88
||||||||||| ||||||||
Sbjct: 100 taatgaatctagacatatat 81
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | ||||||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 89/110 (80%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 55 attcatatatatgttaatgaatctaaacatatatgt--gtctatattcattaacatctat 112
|||||||| ||||||||||||||| |||||||| | ||| ||||||||||||| ||
Sbjct: 114 attcatattaatgttaatgaatctagacatatatatccaactagattcattaacatccat 55
Query: 113 ataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|| ||||||| || |||||| | |||| | | ||||||||||| ||||
Sbjct: 54 atgaatatgggtaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 71 atgaatcta 79
|||||||||
Sbjct: 80 atgaatcta 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||| | ||||| | ||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 71 atgaatcta 79
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 56.0 bits (28), Expect = 2e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 92 tctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaa 151
|||| ||| |||||||||||||| ||| ||||| || ||||||||||||| | | |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 152 cggaggtagta 162
||||| ||||
Sbjct: 15 tggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||| ||||||| ||||| | |||||||||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 71 atgaatcta 79
|||||||||
Sbjct: 74 atgaatcta 66
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 63.9 bits (32), Expect = 7e-10
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||||| ||| |||||||| |||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 70 aatgaatctaaacatatatgtgtctatattcattaa 105
|||| ||||| |||||||| | |||| || ||||||
Sbjct: 70 aatggatctagacatatatctatctagatccattaa 35
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | |||||| | |||||||||| |||| |||||||| ||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 71 atgaatctaaacatat 86
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| ||| |||| || |||||| | |||||| | ||||||||||
Sbjct: 75 attcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggag 134
Query: 157 gtagta 162
| ||||
Sbjct: 135 ggagta 140
>RF00906;MIR1122;AP005261.4/109260-109376 39947:Oryza sativa
Japonica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 109 ctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagtag 163
|||||||||||||||| |||||| ||||||||||| | || |||||||| |||||
Sbjct: 60 ctatataaatatggacgatactaaaaagtcttatattatggaacggaggaagtag 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 108 tctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| || ||| ||||||||| | | ||||||||||| ||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatata 63
||||||||||||| |||| ||||||||||| ||| || |||||||| |||||
Sbjct: 114 ctacttcctccgttccataatataagactttttagtatcgtccatatttatata 61
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 92/111 (82%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||||||| | | |||| | |||||||||| ||| |||||||| || ||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 70 aatgaatctaaaca--tatatgtgtctatattcattaacatctatataaat 118
|||||||||| | | ||||| |||||| ||||||||||||| ||||||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaat 49
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 63.9 bits (32), Expect = 7e-10
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | ||||||||||||||||| ||| |||||| || ||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcatt-gccacattcatttagatgtta 81
Query: 71 atgaatctaaacatat 86
|||||||||||||||
Sbjct: 80 ttgaatctaaacatat 65
>RF00906;MIR1122;AAAA02021964.1/45093-44977 39946:Oryza sativa
Indica Group
Length = 117
Score = 63.9 bits (32), Expect = 7e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 108 tctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||||||||||| || ||| ||||||||||| | ||||||||||| ||||
Sbjct: 59 tctatataaatatggacgatgctaaaaagtcttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| | |||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | | ||||| |||||||||||||||||||| |||| ||| ||| ||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||| | | ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 89/107 (83%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||| | |||||| | || ||||||| ||| |||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 70 aatgaatct--aaacatatatgtgtctatattcattaacatctatat 114
||||||||| | | |||||| |||||| ||||||||||||| ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 129/161 (80%), Gaps = 2/161 (1%)
Strand = Plus / Plus
Query: 7 ttactacttcctccgtatcatattataagactttctagcattatccatattcatatatat 66
|||||||| ||||||| ||| | | |||| | || |||||||| ||| |||||||| ||
Sbjct: 1 ttactactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgat 60
Query: 67 gttaatgaatctaaac--atatatgtgtctatattcattaacatctatataaatatggac 124
||||||||||||| || |||||| | |||| |||||||||||| |||| ||| |||
Sbjct: 61 gttaatgaatctagacatatatatctatctagattcattaacattaatatgaatgtggga 120
Query: 125 natactagaaagtcttataatctgaaacggaggtagtagaa 165
|| ||| || | |||||| | ||||||||||| |||||||
Sbjct: 121 aatgctaaaatgacttatattgtgaaacggaggaagtagaa 161
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||| | | |||| | |||||||||| |||| |||||||| ||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgt 101
Query: 69 taatgaatctaaacatatat 88
||||||||||| ||||||||
Sbjct: 100 taatgaatctagacatatat 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 123/155 (79%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | || ||||||| ||| |||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 71 atgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatggacnata 128
||||||||| | | ||||| |||||| |||||||||||| |||| ||| |||| ||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagtag 163
|||||| | |||| | | ||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 124/154 (80%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| |||| || ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacnata 128
|||||||| | | |||||| |||||| ||||||||||| | |||| ||| ||| |||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||| | | ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 126/157 (80%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||||||||||| ||| | |||||| | ||||| | || |||| |||||||| |||
Sbjct: 2 tactacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatg 61
Query: 68 ttaatgaatct--aaacatatatgtgtctatattcattaacatctatataaatatggacn 125
||||||||||| | | |||||| | |||| ||||||||| ||| |||| ||| |||
Sbjct: 62 ttaatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaa 121
Query: 126 atactagaaagtcttataatctgaaacggaggtagta 162
|| |||||| | |||||| | ||||||||||| ||||
Sbjct: 122 atgctagaatgacttatattgtgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | |||||| | |||||||||| ||| |||||||| || |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 71 atgaatctaaacatatat 88
||||||||| | ||||||
Sbjct: 98 atgaatctagatatatat 81
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 111/137 (81%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 30 tataagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tata 87
|||||| | |||||||||| | || |||||||| || |||||||||||||| | ||||
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
| |||||| ||||||||||| | |||||||| ||| || |||||| | |||| | | |
Sbjct: 79 tatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgt 20
Query: 148 gaaacggaggtagtaga 164
|||||||||| ||||||
Sbjct: 19 gaaacggagggagtaga 3
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||||| | |||| | |||||||||| | ||||||||||| ||||
Sbjct: 160 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 101
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 100 taatgaatcta 90
Score = 60.0 bits (30), Expect = 1e-08
Identities = 125/156 (80%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | |||||||| | || |||||||| |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 70 aatgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacnat 127
|||||||||| | |||| | | | ||| |||||||||||||||||| ||||| | | ||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 128 actagaaagtcttataatctgaaacggaggtagtag 163
|||||| | |||| | | ||||||||||| |||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 96
|||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 97 attcattaacatctatat 114
||||||||||| ||||||
Sbjct: 70 attcattaacacctatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 90/110 (81%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaacatatatg--tgtctatattcattaacatctat 112
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 49 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 108
Query: 113 ataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|| ||| |||| || |||||| | |||| | | ||||||||||| ||||
Sbjct: 109 atgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||| | |||||| | ||||||||| ||| |||||||| |||||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 70 aatgaatctaaacat 84
|||||||||||||||
Sbjct: 73 aatgaatctaaacat 59
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 96
|||||||||| |||| ||||||||| |||||||||||||| ||| ||||| | ||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 97 attcattaacatctatat 114
||||||||||| ||||||
Sbjct: 63 attcattaacacctatat 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/71 (84%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 55 attcatatatatgttaatgaatctaaacatatatg--tgtctatattcattaacatctat 112
||||||||| |||||||||||||| | |||||| |||||| ||||||||||| ||||
Sbjct: 84 attcatataggtgttaatgaatctagatatatatagatgtctagattcattaacacctat 25
Query: 113 ataaatatgga 123
|| ||| ||||
Sbjct: 24 atgaatgtgga 14
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaa--acatatatgtgtctat 96
|||||||||| ||| |||||||| |||||||||||||||| | |||||| ||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctag 45
Query: 97 attcattaacatctatat 114
||||||||||||| ||||
Sbjct: 44 attcattaacatcaatat 27
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
|||||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatat 56
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 60.0 bits (30), Expect = 1e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | |||||| | |||| ||||| ||| ||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 71 atgaatctaaacatatatgtgtctatattcattaacat 108
|||||| || |||||||| | |||| ||||||||||||
Sbjct: 65 atgaatttagacatatatatatctagattcattaacat 102
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| | || ||||||| ||||||||||||||| | |||||| |||||| ||
Sbjct: 128 ttctagcatttttcacattcatactcatgttaatgaatctagatatatatatgtctaaat 69
Query: 99 tcattaacat 108
||||||||||
Sbjct: 68 tcattaacat 59
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||| | ||||| | |||| | |||||||||| || ||||||||| ||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 72 atgaatctagacatatat 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||| ||||||| ||||| | |||| | ||||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatatatatgt 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 82 catatatgtgtctatattcattaacatctatat 114
||||||| |||||| ||||||||||||||||||
Sbjct: 52 catatatatgtctagattcattaacatctatat 84
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | |||||||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 83 atatatgtgtctatattcattaacatctatataaatatg 121
|||||| |||||| ||||||||||||| |||| ||||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatg 46
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| |||||||| ||| |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 75 atgaatctagacatatat 58
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| ||||||||||||| |||||||||||||||
Sbjct: 117 ttctagcattttccatattcatattgatgttaatgaatcta 77
Score = 50.1 bits (25), Expect = 1e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 91 gtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaa 150
||||| ||||||||||||| |||| |||||||| || |||||| | |||| | | ||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaa 133
Query: 151 acggaggtagta 162
||||||| ||||
Sbjct: 134 acggagggagta 145
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctaaacatata 87
||||||||| |||||||
Sbjct: 65 atgaatctagacatata 81
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||||||||||| ||| | | |||| | |||||||||| ||| |||||||| |||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 68 ttaatgaatctaaacat 84
|||||||||||| ||||
Sbjct: 62 ttaatgaatctagacat 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | |||| | |||||||||| ||| |||||||| |||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 90 aatgaatcta 81
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
||||| |||||| ||||| | ||||||||||||||||| |||||||||||||
Sbjct: 5 tactttctccgtttcataatgtaagactttctagcattgcccatattcatata 57
Score = 48.1 bits (24), Expect = 4e-05
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 106 catctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||| ||||||| | || ||||||||||||| | | ||||||||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggag 11
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 12 acttcctccgtatcatattataagactttctagcattatccatattcatatatatgttaa 71
||||||||||| ||| | |||||| | || ||||||| ||| ||||||||| ||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 72 tgaatctaaacatatat 88
|||||||| ||||||||
Sbjct: 71 tgaatctagacatatat 55
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 103/127 (81%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 96
|||||||||| ||| |||||||| |||||||||||||| | | |||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtctac 92
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| ||| ||| ||| ||||| | |||| | | ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 157 gtagtag 163
| |||||
Sbjct: 153 gaagtag 159
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 88 tgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatct 147
|||||||| |||||||||||||||||| ||| ||| | || ||| ||||| ||| | | |
Sbjct: 68 tgtgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattat 127
Query: 148 gaaacggaggtagta 162
|||||||||| ||||
Sbjct: 128 gaaacggagggagta 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||| ||||||| ||||| | ||||||||||||||||| ||| ||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | ||| ||||| ||||||| ||| ||||||||| ||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 71 atgaat 76
||||||
Sbjct: 82 atgaat 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 105 acatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagta 162
|||||||||| ||| ||| | || ||||||||||||| | | ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | |||| | ||| |||||| |||||||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 70 aatgaatctaaacatatatgtgtctat--attcattaacatctatataaat 118
|||||||||| |||||||| | | ||| ||| ||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatataaat 114
Score = 50.1 bits (25), Expect = 1e-05
Identities = 69/84 (82%)
Strand = Plus / Minus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||| ||||||||||||| |||| ||||||| || || ||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttac 25
Query: 143 aatctgaaacggaggtagtagaaa 166
| | ||||||||||| ||||||||
Sbjct: 24 attgtgaaacggagggagtagaaa 1
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||| | | |||| | |||||||||| ||| |||||||| ||||
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 69 taatgaatctaaacatatat 88
||||||||||| ||||||||
Sbjct: 100 taatgaatctagacatatat 81
Score = 44.1 bits (22), Expect = 6e-04
Identities = 66/81 (81%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||| ||||||||||||| |||| ||| ||| || |||||| | ||||
Sbjct: 79 atatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttac 138
Query: 143 aatctgaaacggaggtagtag 163
| | ||||||||||| |||||
Sbjct: 139 attgtgaaacggagggagtag 159
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 91/111 (81%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | |||| | ||| |||||| |||||||||||| |||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 70 aatgaatctaaacatatatgtgtctat--attcattaacatctatataaat 118
|||||||||| |||||||| | | ||| ||| ||||||||| ||||||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatataaat 47
Score = 50.1 bits (25), Expect = 1e-05
Identities = 69/84 (82%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||| ||||||||||||| |||| ||||||| || || ||| | ||||
Sbjct: 77 atatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttac 136
Query: 143 aatctgaaacggaggtagtagaaa 166
| | ||||||||||| ||||||||
Sbjct: 137 attgtgaaacggagggagtagaaa 160
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 85 atatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 144
|||||| |||| ||||||||||||| ||| |||| ||| | || ||||||||||||| |
Sbjct: 82 atatgtttctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacat 23
Query: 145 tctgaaacggaggtagtag 163
| |||||| |||| |||||
Sbjct: 22 tatgaaactgagggagtag 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatat 62
|||||||||| | ||||| | ||||||||||||||||| ||| ||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| |||| || ||||| | ||||||||||||||||| ||| ||| ||| ||||
Sbjct: 3 actactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgt 62
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 63 taatgaatcta 73
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | |||||| | |||||||||| ||| |||||||| ||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 71 atgaatctaaacatat 86
||||||||| ||||||
Sbjct: 80 atgaatctatacatat 65
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| ||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 71 atgaatctaaac--atatatgtgtctatattcattaacatctatat 114
||||||||| || |||||| |||||| |||||||| |||| ||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatat 110
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 66/78 (84%), Gaps = 2/78 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaac--atatatgtgtctat 96
|||||||||| ||| |||||||| ||||||||||||||| || |||||| | ||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctag 45
Query: 97 attcattaacatctatat 114
||||||||||||| ||||
Sbjct: 44 attcattaacatcaatat 27
Score = 46.1 bits (23), Expect = 2e-04
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 112
|||||||| ||||||||||||||| | | ||||| |||||| ||||||||||||| ||
Sbjct: 23 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcaat 82
Query: 113 at 114
||
Sbjct: 83 at 84
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatatatatgt 68
|||||| ||||||| ||| | | |||| | |||||||||| |||| |||||||| ||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 63 taatgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 87 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatc 146
|||| |||| ||||||||||||| |||| ||| |||| || |||||| | |||| | |
Sbjct: 80 atgtttctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattg 21
Query: 147 tgaaacggaggtagtag 163
||||||||||| |||||
Sbjct: 20 tgaaacggagggagtag 4
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | ||||| |||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 82/100 (82%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 65 atgttaatgaatctaaaca--tatatgtgtctatattcattaacatctatataaatatgg 122
||||||||||||||| | | ||||| |||||| ||||||||| ||| |||| ||| |||
Sbjct: 59 atgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgg 118
Query: 123 acnatactagaaagtcttataatctgaaacggaggtagta 162
||||||||| |||||| | | ||||||||||| ||||
Sbjct: 119 gaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 46.1 bits (23), Expect = 2e-04
Identities = 86/106 (81%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | |||||| |||||| ||| ||| |||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 71 atgaatctaaac--atatatgtgtctatattcattaacatctatat 114
||||||||| || |||||| | |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatat 53
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||||| | |||| | |||||||||| ||||||||||| || ||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 70 aatgaatctaaacatatatgtg 91
|||||||||||| ||| |||||
Sbjct: 67 aatgaatctaaatataaatgtg 46
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | |||| | |||||||||| ||| ||||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatata 63
||||||||||||| ||||| | |||| | ||||||||||| |||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattacccatatgcatata 57
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
|||||||||| ||| |||||||| ||||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagacatatat 82
Score = 48.1 bits (24), Expect = 4e-05
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 84 tatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttata 143
||||| |||||| ||||||||||||| |||| ||| ||| || |||||| | |||| |
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 144 atctgaaacggaggtagta 162
| ||||||||||||||||
Sbjct: 23 ttgtgaaacggaggtagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcattatccatattcatat 62
|||||||||||||| ||| | | |||| | |||||||||| |||||||||||||
Sbjct: 133 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
Score = 44.1 bits (22), Expect = 6e-04
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacat 84
|||||||||| |||| |||||||| |||||| |||||||||||||
Sbjct: 33 ttctagcattttccacattcatattgatgtta-tgaatctaaacat 77
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| ||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 71 atgaatctaaacatatat 88
||||||||| ||||||||
Sbjct: 65 atgaatctagacatatat 82
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaaca--tatatgtgtctat 96
||||| |||| |||| |||||||| || |||||||||||||| | ||||| ||||||
Sbjct: 130 ttctaacattttccacattcatattgatattaatgaatctaaatagatatatatgtctag 71
Query: 97 attcattaacatc 109
|||||||||||||
Sbjct: 70 attcattaacatc 58
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||| | | |||| | |||||||||| ||| ||||||| |||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 70 aatgaatctaaacatatat 88
|||||||||| ||||||||
Sbjct: 64 aatgaatctagacatatat 82
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||||||||||| ||||| | |||| | ||||| |||| | || |||||||| |||||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 71 aatgaatcta 62
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 35 gactttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatcta 45
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 111 ttctagcatttcccatattcatattgatgttaatgaatcta 71
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcat 60
|||||||||||| ||||| | |||| | |||||||||| ||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| ||||||||||||| |||| ||||||| || |||||| | |||| | | |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 150 aacggaggtagta 162
|||||||| ||||
Sbjct: 127 aacggagggagta 139
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||||| |||||| | |||||||||| |||| ||||||| ||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||||| || ||||||| ||||| |||||| ||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 71 atgaatctaaaca 83
|||||| ||||||
Sbjct: 77 atgaatttaaaca 65
Score = 44.1 bits (22), Expect = 6e-04
Identities = 63/77 (81%)
Strand = Plus / Plus
Query: 86 tatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataat 145
||||||| || |||||||||||||||||| ||||| | || ||| || |||||| | |
Sbjct: 61 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 120
Query: 146 ctgaaacggaggtagta 162
||||||||||| ||||
Sbjct: 121 gtgaaacggaggaagta 137
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| || | |||||| | |||||||||| | |||||||||| ||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 71 atgaatcta 79
|||||||||
Sbjct: 86 atgaatcta 78
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 91 gtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaa 150
||||| |||||||| |||| |||| ||||||| ||||||||| | |||| | | ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 151 acggaggtagtagaaa 166
||||||| ||||||||
Sbjct: 125 acggagggagtagaaa 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 10 ctacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtt 69
||||| ||||||| ||||| | |||| | |||||| ||| |||||||||||| ||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 77 aatgaatcta 68
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||| | | ||||| ||||||||||| ||| || | ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 71 atgaatctaaacatata 87
|||||||||||||||||
Sbjct: 65 atgaatctaaacatata 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 9 actacttcctccgtatcatattataagactttctagcatta 49
|||||||||||||| || | ||||||||||||||||||||
Sbjct: 140 actacttcctccgttccacaatataagactttctagcatta 100
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
|||||||||||||||| || || ||| | || ||||||| ||||| | | ||||||||||
Sbjct: 70 attcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacggag 11
Query: 157 gtagta 162
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 50.1 bits (25), Expect = 1e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| |||||| ||||||||||||| |||| ||| |||| ||| ||||| | ||||
Sbjct: 78 atatatatgtctagattcattaacatcaatatgaatgtggaaaatattagaatgacttac 137
Query: 143 aatctgaaacggaggtagta 162
| | ||||||||||| ||||
Sbjct: 138 attgtgaaacggagggagta 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 50 tccatattcatatatatgttaatgaatctaaacatatat 88
|||| |||||||| ||||||||||||||| ||||||||
Sbjct: 118 tccacattcatattgatgttaatgaatctagacatatat 80
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||||| || ||||||| ||||| |||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 71 atgaatctaaaca 83
|||||| ||||||
Sbjct: 65 atgaatttaaaca 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 86 tatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataat 145
||||||| || |||||||||||||||||| ||||| | || ||| || |||||| | |
Sbjct: 81 tatgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacatt 22
Query: 146 ctgaaacggaggtagta 162
||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatata 63
||||||||| || ||||| |||||||||||| |||||| ||||||||||||
Sbjct: 5 tacttcctctgtttcatactataagactttcaagcattgcacatattcatata 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcatta 49
|||| ||||||| ||||| |||||||||||| |||||||
Sbjct: 130 tactccctccgtttcatactataagactttcaagcatta 92
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| || | |||||| | |||||||||| | |||||||||| ||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| |||||||||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
|||||| ||||||||||||| |||| ||||||| || |||||| | |||| | | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 150 aacggaggtagta 162
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcat 60
|||||||||||| ||||| | |||| | |||||||||| ||||||||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat 90
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 50.1 bits (25), Expect = 1e-05
Identities = 120/152 (78%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | |||||| | |||||||||| ||| || |||| ||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 71 atgaatctaaacatatatgtgtctatattcattaacatctatataaatatggacnatact 130
|||||||| |||||| | |||| ||||||||||||| |||| ||| ||| || ||
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 131 agaaagtcttataatctgaaacggaggtagta 162
|||| | |||| | | ||||||||||| ||||
Sbjct: 36 agaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 99/124 (79%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| ||| |||||||| ||||||||||||||| | | || |||| | ||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagataggcatatgtccagat 92
Query: 99 tcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggaggt 158
||||||||||| ||||||| ||| || |||||| | |||||| | |||||||||||
Sbjct: 93 tcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggagga 152
Query: 159 agta 162
||||
Sbjct: 153 agta 156
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| | |||||||||| ||| |||||||| || |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 71 atgaatcta 79
|||||||||
Sbjct: 55 atgaatcta 47
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 50.1 bits (25), Expect = 1e-05
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 98 ttcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggagg 157
|||||||||||| |||||||| ||| ||||||||| | |||| | | |||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 158 tagtagaa 165
|||||||
Sbjct: 147 aagtagaa 154
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 83 atatatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttat 142
|||||| | |||| |||||||| |||| ||||||||||| ||||||||| | |||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 143 aatctgaaacggaggtagta 162
| | ||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||| | | |||| | |||||||||| ||| ||||||| |||
Sbjct: 165 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatg 106
Query: 68 ttaatgaatctaaacatatat 88
|||||||||||| ||||||||
Sbjct: 105 ttaatgaatctagacatatat 85
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 1e-05
Identities = 67/81 (82%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||| | |||||| | |||||||||| | | |||||||| |||
Sbjct: 155 tactactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatg 96
Query: 68 ttaatgaatctaaacatatat 88
||||||||||| ||||||||
Sbjct: 95 ctaatgaatctagacatatat 75
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | |||||| | || ||| ||| |||| |||||||| ||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 71 atgaatcta 79
|||||||||
Sbjct: 70 atgaatcta 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||||||| |||| ||| |||| |||||| || | |||||| | ||||||||||
Sbjct: 65 attcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacggag 124
Query: 157 gtagta 162
| ||||
Sbjct: 125 gaagta 130
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| || |||||||||| |||||||||||||||
Sbjct: 33 ttctagcattttctatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | |||||| | |||||||||| || |||||||| ||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 71 atgaatcta 79
|||||||||
Sbjct: 67 atgaatcta 59
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatatatatg 67
||||||| ||||||| ||||| | |||| | |||||||||| | | |||||||| |||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatg 67
Query: 68 ttaatgaatcta 79
||||||||||||
Sbjct: 66 ttaatgaatcta 55
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatat 62
|||||||||||| ||| | | |||| | |||||||||| |||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 101
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | |||||||||| |||| |||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacnata 128
||||||||| |||||||| | | ||| |||||||| |||| |||| || || || |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
||||| | |||| | | ||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaacatat 86
|||||||| ||||||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctaaacatat 80
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 92 tctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaa 151
|||| |||||||| |||| ||||||||||| | ||||||||| | |||| | | |||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 152 cggaggtagta 162
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 122/154 (79%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||| ||||||| ||||| | |||| | |||||||||| |||| |||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatggacnata 128
||||||||| |||||||| | | ||| |||||||| |||| |||| || || | |||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 129 ctagaaagtcttataatctgaaacggaggtagta 162
|||||| | |||| | | ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008207.1/37675389-37675292 39947:Oryza sativa
Japonica Group
Length = 98
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattc 58
|||||||| || ||||| | ||||||||||||||||| |||||||||
Sbjct: 5 tacttcctatgtttcataatgtaagactttctagcattgtccatattc 52
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatat 66
|||||||||| |||||||||||||||||
Sbjct: 102 ttctagcattttccatattcatatatat 75
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatat 62
|||||||||||| ||| | |||||| | |||||||||| |||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatat 56
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 2e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| ||| |||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatc 77
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 46.1 bits (23), Expect = 2e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 101 attaacatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtag 160
||||||||||| || ||| || | ||| |||||||||||||| | ||||||||||| ||
Sbjct: 63 attaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacggagggag 122
Query: 161 ta 162
||
Sbjct: 123 ta 124
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacggag 156
||||||||| ||| ||||||||||||| || |||||| | |||| | | ||||||||||
Sbjct: 81 attcattaatatcaatataaatatggaaaatgctagaatgacttacattgtgaaacggag 140
Query: 157 gtagta 162
| ||||
Sbjct: 141 ggagta 146
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 2e-04
Identities = 86/106 (81%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||| | | |||| | |||||||||| || |||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 71 atgaatct--aaacatatatgtgtctatattcattaacatctatat 114
|||||||| | | |||||| |||||| ||||||||| ||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatat 53
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
|||||||||||| ||||| | |||| | |||||| ||| || |||||||| ||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 71 atgaatctaaacatatatg 89
||||||||| ||| |||||
Sbjct: 65 atgaatctagacaaatatg 83
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 8 tactacttcctccgtatcatattataagactttctagcattatccatattcatat 62
||||||||||||||| ||| | |||||| | |||||||||| ||| ||||||||
Sbjct: 117 tactacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 90 tgtctatattcattaacatctatataaatatggacnatactagaa 134
|||||| ||| |||||||||||||| ||| ||||| || ||||||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
>RF00906;MIR1122;AAAA02018216.1/16118-16192 39946:Oryza sativa
Indica Group
Length = 75
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 135 agtcttataatctgaaacggaggtagtaga 164
||||||||||| ||||||||||| ||||||
Sbjct: 32 agtcttataatatgaaacggagggagtaga 3
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 11 tacttcctccgtatcatattataagactttctagcatt 48
|||||||||| | ||||| | |||||||||||||||||
Sbjct: 5 tacttcctccatttcataatgtaagactttctagcatt 42
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 40 tctagcattatccatattcatatatatgttaatgaatctaaacatatatg 89
|||| |||| |||| |||||||| ||||||||||||||| | |||||||
Sbjct: 101 tctaacattttccacattcatattgatgttaatgaatctagatatatatg 52
>RF00906;MIR1122;AACV01025230.1/832-919 39947:Oryza sativa Japonica
Group
Length = 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 137 tcttataatctgaaacggaggtagta 162
||||||||||||||||||||| ||||
Sbjct: 59 tcttataatctgaaacggagggagta 84
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 11 tacttcctccgtatcatattataagactttctagcattatccatattcatatatatgtta 70
||||||||| || ||| | | |||||||||||||| || ||| ||||||||| || |||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 71 atgaat 76
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 91 gtctatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaa 150
||||| ||||||||| |||||||| |||||| | ||| ||||| | |||| | | ||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaa 17
Query: 151 acggaggtagtag 163
||||||| |||||
Sbjct: 16 acggagggagtag 4
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 104 aacatctatataaatatggacnatactagaaagtcttataatctgaaacggaggtagtag 163
||||||||||| |||||| | || ||||||||||||| | | | ||||||||| |||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagtag 109
Query: 164 a 164
|
Sbjct: 110 a 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatccatattcatatatatgtt 69
||||||||||||||||| |||||||||||| |||||
Sbjct: 87 taagactttctagcattgctcatattcatatagatgtt 50
