miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 95.6 bits (48), Expect = 1e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Score = 67.9 bits (34), Expect = 3e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||||||| |||||||| ||||||||||||| ||| ||||||||||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctag 50
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 93.7 bits (47), Expect = 5e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||
Sbjct: 139 tataagactttctagcattgcccacattcatatagatgctaatgaatctagacatatata 80
Query: 70 tgt 72
|||
Sbjct: 79 tgt 77
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| |||||||| ||||| ||||||||||| ||||||| ||| ||||||||
Sbjct: 24 tataagactttctagcattgcccacaatcatatagatgttaatgaacctatacacatata 83
Query: 70 t 70
|
Sbjct: 84 t 84
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaa 16
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 116 tgggcaatgctagaaagtcttataatatgaaa 147
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/73 (91%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctagg--cacatata 69
||||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggcacacatata 78
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 77 tgtctagattcat 65
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||| ||| ||||||| |||||||| ||||||||||||| |||||||||
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctag--acatatatg 83
Query: 72 t 72
|
Sbjct: 84 t 84
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 7e-18
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 36 tagcattgtccacattcatatagatgctaatgaatctaggcatatatat 84
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 127 tagcattttccacattcatattgatgttaatgaatctag 89
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 87.7 bits (44), Expect = 3e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 2 tttcaggctataagactttatagcattgtccacattcatatagatgctaatgaatc 57
||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 128 tttcaggctataagactttctagcactgtccacattcatatagatgttaatgaatc 73
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 2 tttcaggctataagactttatagcattgtccacattcatatagatg 47
||||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 16 tttcaggttataagactttctagcactgtccatattcatatagatg 61
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 1e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
|||| |||| |||||||| ||||||||||||||||| |||||||||||| |||| |||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctagacacacatatg 85
Query: 72 tttagattcat 82
| |||||||||
Sbjct: 86 tctagattcat 96
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||||||| | |||||| |||||| |||||||||||| || || | ||
Sbjct: 135 taagactttgtagcattgcttatattcatctagatgttaatgaatctagacatatgtgtg 76
Query: 72 tttagattcat 82
| |||||||||
Sbjct: 75 tctagattcat 65
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 85.7 bits (43), Expect = 1e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
|||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcaca 60
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctag 50
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa
Indica Group
Length = 120
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctagg--cacatata 69
||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 65 tgtctagattcat 77
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| || ||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctag--acatatatg 59
Query: 72 t 72
|
Sbjct: 58 t 58
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 83.8 bits (42), Expect = 5e-16
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||||||||||||||||||||||||| |||| ||||||| |||| |||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatctagacacacataca 60
Query: 72 tttagattcatatgggtaatgctagaaagtctta 105
| || || |||||| |||||||| |||||||||
Sbjct: 59 tctatatgaatatggataatgctaaaaagtctta 26
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatg 47
||||||||| ||||||| |||| |||||||||||||
Sbjct: 26 taagactttttagcattatccatattcatatagatg 61
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatata 83
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| |||||||| || |||||||||||||| |||||||||||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatcta 90
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 83.8 bits (42), Expect = 5e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatat 68
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatat 57
Score = 69.9 bits (35), Expect = 7e-12
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 11 ataagactttatagcattgtccacattcatatagatgctaatgaatctaggc--acatat 68
|||||||||| |||||||| ||| ||||||||| ||| |||||||||||||| ||||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 69 atgtttagattcat 82
||| |||||||||
Sbjct: 61 atgcctagattcat 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 81 atatgggtaatgctagaaagtcttat 106
||||||| ||||||||||||||||||
Sbjct: 26 atatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| || ||||| |||||||||||||||||||||||||||||| || |||||
Sbjct: 119 tataagactttctatcattgcccacattcatatagatgctaatgaatctagacatatata 60
Query: 70 t 70
|
Sbjct: 59 t 59
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatg 47
||||||||| ||||||||||||||||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatg 61
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| |||||||| ||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 139 tataagactttctagcattgcccacattcatatatatgttaatgaatcttggcacatata 80
Query: 70 t 70
|
Sbjct: 79 t 79
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| | |||||| ||||||||||||| ||| |||| ||||||| || |||||
Sbjct: 24 tataagactttctggcattgcccacattcatatatatgttaataaatctagacatatata 83
Query: 70 tgt 72
|||
Sbjct: 84 tgt 86
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 7e-15
Identities = 91/107 (85%), Gaps = 7/107 (6%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggc-acatat 68
||||||||||| |||||||||||||||||||||| ||| |||||||||||| | ||||||
Sbjct: 116 tataagactttctagcattgtccacattcatatatatgttaatgaatctagacaacatat 57
Query: 69 atgtttagattcatatgggtaatgctagaaagtcttatgatatgaaa 115
|| || || ||||||||||||||||||||||| ||| ||||
Sbjct: 56 at------atgaatgtgggtaatgctagaaagtcttataataagaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 aatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||| ||||||||
Sbjct: 98 aatgctagaaagtcttataatatgaaa 124
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatata 43
||||||||||| ||||||| |||||||||||||
Sbjct: 24 tataagactttctagcattacccacattcatata 57
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 140 tataagactttctagcattgcccacattcatatagatgttaatgaatctag 90
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
||||||||||||||||||||||| ||||||||
Sbjct: 47 tgggtaatgctagaaagtcttataatatgaaa 16
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatg 47
||||||||||| ||||||| |||||||||||||||||
Sbjct: 24 tataagactttctagcattacccacattcatatagatg 61
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 77.8 bits (39), Expect = 3e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 107 tataagactttctagcattgcccacattcatatagatgttaatgaatctag 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 84 tgggcaatgctagaaagtcttataatatgaaa 115
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 113 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 90 tgggcaatgctagaaagtcttataatatgaaa 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattca 39
||||||||||| |||||||| |||||||||
Sbjct: 24 tataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggca 63
||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatagatgttaacgaatctaggca 77
Score = 54.0 bits (27), Expect = 4e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1 atttcaggctataagactttatagcattgtccacattcatata 43
||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 124 atttcagattataagactttctagcattgcccacattcatata 82
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||||||| |||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatctagacaca 34
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 113 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 90 tgggcaatgctagaaagtcttataatatgaaa 121
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattca 39
||||||||||| |||||||| |||||||||
Sbjct: 24 tataagactttctagcattgcccacattca 53
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag--gcacatata 69
||||||||| |||| ||| ||||||||||||| ||| |||||||||||| ||||||||
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 86 tgtttagattcat 98
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| |||||||| |||||||||||||||| ||||||||||
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatcta 90
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/61 (91%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||||||||| ||||||||||||||| |||||||||||| |||||||||
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctag--acatatatg 83
Query: 72 t 72
|
Sbjct: 84 t 84
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatct--aggcacatata 69
||||||||| ||| ||||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 137 taagactttctaggtttgtccacattcatatagatgttaatgaatctaaacacacatata 78
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 77 tgtctagattcat 65
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 73
Score = 75.8 bits (38), Expect = 1e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 141 tataagactttctagcattgcccacattcatatagatgttaatgaatcta 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaa 16
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 118 tgggcaatgctagaaagtcttataatatgaaa 149
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 137 taagactttttaggattgtccacattcatatagatgttaatgaatctag 89
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| ||| |||| ||| ||||||||||||| ||||||| ||||
Sbjct: 24 tataagactttctagtattgcccatattcatatagatgttaatgaacctag 74
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 73.8 bits (37), Expect = 4e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| ||||||| ||||||||||| |||||| |||||||||||| || |||||||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctagacatatatatg 85
Query: 72 t 72
|
Sbjct: 86 t 86
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctag 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctagg 61
||||||||| |||||||| | | |||||||| |||| |||||||||||||
Sbjct: 26 taagactttctagcattgcctatattcatattgatgttaatgaatctagg 75
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctag 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 26 taagactttatagcattacccacattcatatagatgctaataaatcta 73
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| ||| |||||||||||||||||||||| ||||||||||||
Sbjct: 26 taagactttttaggattgtccacattcatatagatgttaatgaatctag 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| ||| |||| ||| ||||||||||||| ||||||| ||||
Sbjct: 139 tataagactttctagtattgcccatattcatatagatgttaatgaacctag 89
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctag 89
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||||| ||||||| |||||||||||||||| |||||||||||| |||| ||||
Sbjct: 26 taagactttttagcattcctcacattcatatagatgttaatgaatctagacacacatat 84
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaataaatctag 74
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 4e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctag 74
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||||| |||||||| |||||||||||||||| |||||||||||| |||| ||||
Sbjct: 137 taagactttttagcattgctcacattcatatagatgttaatgaatctagacacacatat 79
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||||||||| |||||||||||||||||| ||||||| |||| ||||||| ||||
Sbjct: 24 tataagactttctagcattgtccacattcacatagatgttaataaatctagacaca 79
Score = 67.9 bits (34), Expect = 3e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatg 47
||||||||||| ||||||||||||||||||||||||||
Sbjct: 118 tataagactttctagcattgtccacattcatatagatg 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 aatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 9 ctataagactttatagcattgtccacattcatatagatgctaatgaat 56
|||||||||||| ||| |||||||||||||||||| ||||||||||||
Sbjct: 23 ctataagactttctagtattgtccacattcatataaatgctaatgaat 70
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 81 atatgggtaatgctagaaagtcttatgatatgaaa 115
||||||| |||||||||||||||||| ||||||||
Sbjct: 69 atatgggcaatgctagaaagtcttataatatgaaa 103
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatg 53
||||||||| |||||||| | ||||||||||||||| |||||
Sbjct: 26 taagactttctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 69.9 bits (35), Expect = 7e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 121 tataagactttctagcattacccatattcatatagatgctaatgaatctag 71
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||| |||| |||||||| || ||||||||||||| ||||||||||||
Sbjct: 24 tataagtctttctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 81 atatgggtaatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||||||||||| |||||||
Sbjct: 95 atatgggtaatgctagaaagtcttatattatgaaa 129
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa
Japonica Group
Length = 159
Score = 69.9 bits (35), Expect = 7e-12
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| ||| |||| ||||||||||||||||| ||||||||||| |||| |||
Sbjct: 24 tataagactttctagaattgcccacattcatatagatgttaatgaatctatacacacata 83
Query: 70 tgt 72
|||
Sbjct: 84 tgt 86
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 26 attgtccacattcatatagatgctaatgaatctaggcacatatatgt 72
|||| ||||||||||||||||| ||||||||||| |||| ||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgt 79
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||||| |||||||| || ||||||||||||| |||||||||||| |||||||||
Sbjct: 137 taagactttctagcattgctcatattcatatagatgttaatgaatctagacacatatat 79
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
|||| |||| ||| |||| ||||||||||||||||| |||||||||||| || |||||||
Sbjct: 26 taagtctttctagtattgcccacattcatatagatgttaatgaatctagacatatatatg 85
Query: 72 t 72
|
Sbjct: 86 t 86
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 7e-12
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatat 60
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 32 cacattcatatagatgctaatgaatctaggcacatatatgt 72
|||||||||||||||| ||||||||||| || ||||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgt 53
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca--tata 69
||||||||| |||||||| ||| |||||| ||||||||||||||||||| || | |||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 77 tgtttagattcat 65
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacat--ata 69
||||||||| |||||||| |||||| |||||| ||| ||||||||||| ||||| |||
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatctaaacacatacata 85
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 86 tgtctagattcat 98
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 3e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatttagacaca 79
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatg 47
||||||||| |||||||| |||||||||||||||||
Sbjct: 121 taagactttctagcattgcccacattcatatagatg 86
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 67.9 bits (34), Expect = 3e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| ||||||| ||||||||||||| ||| |||||||||||| || |||||
Sbjct: 113 tataagactttctagcattacccacattcatatatatgttaatgaatctagacatatata 54
Query: 70 tg 71
||
Sbjct: 53 tg 52
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
||||||||||||||||||||||| || |||||
Sbjct: 90 tgggtaatgctagaaagtcttataatttgaaa 121
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||||||| ||| ||||||||| ||||||||||||
Sbjct: 116 taagactttctagcattgtccatatttatatagatgttaatgaatctag 68
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||| |||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattca 81
||||||| | |||||||||||||||| ||||||||||| ||| |||||||| | ||||||
Sbjct: 125 tagcatttttcacattcatatagatgttaatgaatctatgcatatatatgtcttgattca 66
Query: 82 t 82
|
Sbjct: 65 t 65
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| ||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctag 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggca--catata 69
||||||||| ||| | || ||| ||||||||||||| |||||||| ||| || ||||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 86 tgtctagattcat 98
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| |||||| |||||||||| ||||||||||||
Sbjct: 126 taagactttctagcattgcccacatacatatagatgttaatgaatctag 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| |||||||| |||||| ||||||||||||
Sbjct: 26 taagactttctagcattgctcacattcacttagatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| ||||||||||||||||| |||| |||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaataaatctag 65
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagat 46
||||||||| ||||||||| |||||||||||||||
Sbjct: 26 taagactttctagcattgttcacattcatatagat 60
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 26 attgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattcat 82
|||| |||||||| ||||||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 121 attgcccacattcttatagatactaatgaatctagccacatatatgtccagattcat 65
Score = 58.0 bits (29), Expect = 3e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatct 58
|||||||| ||||||||||||||||| ||||||||||
Sbjct: 36 tagcattgcccacattcatatagatgttaatgaatct 72
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 65/75 (86%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| || ||||| ||||||||||||| ||| ||||||||||| || |||||
Sbjct: 24 tataagactttctaacattgcccacattcatatatatgtcaatgaatctagacatatata 83
Query: 70 --tgtttagattcat 82
|||||||||||||
Sbjct: 84 tgtgtttagattcat 98
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| ||| |||||||| |||||||||||| |||||||||| ||||||||
Sbjct: 139 tataagactttctagaattgtccatcttcatatagatgtcaatgaatctaaacacatata 80
Query: 70 t 70
|
Sbjct: 79 t 79
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 4e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| |||||||||||| || |||||||||| |||||||||||
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatcta 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| ||||||| |||||||||| ||| || ||||||||||||
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtctta 105
||||||||||||||||||||||
Sbjct: 47 tgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatataga 45
||||||||||||||||||| ||||||||||||||||
Sbjct: 24 tataagactttatagcattatccacattcatataga 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 88 taatgctagaaagtcttatgatatgaaa 115
||||||||||||||||||| ||||||||
Sbjct: 76 taatgctagaaagtcttataatatgaaa 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatata 43
||||||||||| ||||||| |||||||| |||||
Sbjct: 95 tataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 4e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||| ||| |||||||||| |||||| |||||||||||| |||||| |
Sbjct: 26 taagactttgtagcgttgcccacattcatttagatgttaatgaatctag--acatatgta 83
Query: 72 tttagattcat 82
|||||||||||
Sbjct: 84 tttagattcat 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| ||||| | |||||| |||| ||||| |||||||||||
Sbjct: 135 tataagactttttagcactacccacatacataaagatgttaatgaatcta 86
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
|||||||||||||||||||||||||| |||| |||||||
Sbjct: 106 tagcattgtccacattcatatagatgttaataaatctag 68
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaat 56
||||||| |||||||||||||||||||||||||||
Sbjct: 127 tagcattttccacattcatatagatgctaatgaat 93
Score = 54.0 bits (27), Expect = 4e-07
Identities = 45/50 (90%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 35 attcatatagatgctaatgaatc--taggcacatatatgtttagattcat 82
||||||||||||||||||||||| || ||| ||||||||||| ||||||
Sbjct: 49 attcatatagatgctaatgaatctatacgcatatatatgtttaaattcat 98
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| |||||||| ||||||||||||| | | ||||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatatatacgttaatgaatctag 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaa 16
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 89 aatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||| ||||||||
Sbjct: 91 aatgctagaaagtcttataatatgaaa 117
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 81 atatgggtaatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||||||||||| ||||||||
Sbjct: 69 atatgggtaatgctagaaagtcttataatatgaaa 103
Score = 54.0 bits (27), Expect = 4e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaat 56
||||||||||| ||||||| ||| ||||||||||||| ||||||||
Sbjct: 95 tataagactttctagcattacccatattcatatagatgataatgaat 49
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||||| |||||||| ||||||||||||| | | ||||||||||||
Sbjct: 109 tataagactttctagcattgcccacattcatatatacgttaatgaatctag 59
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 86 tgggcaatgctagaaagtcttataatatgaaa 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 89 aatgctagaaagtcttatgatatgaaa 115
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaaagtcttataatatgaaa 16
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||| |||||||| |||||||||||||||| |||||||||||| |||| ||||
Sbjct: 26 taagacttcctagcattgctcacattcatatagatgttaatgaatctagacacacatat 84
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| || ||||| ||||||||| ||||||| ||||||||||||
Sbjct: 137 taagactttttaacattgcccacattcacatagatgttaatgaatctag 89
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 15 gactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||| |||||||| |||||||||||| |||| ||||||||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctag 46
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 15 gactttatagcattgtccacattcatatagatgctaatgaatctaggcacat 66
|||||| || ||||| |||||||||||| |||| |||||||||||| |||||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacat 61
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 16 actttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||| |||||||| ||||||||||||||||| |||||||| ||| ||||
Sbjct: 117 actttttagcattgcccacattcatatagatgttaatgaatttagacaca 68
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatg 47
||||||||| |||||||| |||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
|||||||| |||||||||||||||| |||||||||||| || |||||||
Sbjct: 101 tagcattgcacacattcatatagatgttaatgaatctagacatatatatg 52
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatcta 90
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca--tata 69
||||||||| |||||||| ||| |||||| |||||| |||||||||||| || | |||
Sbjct: 137 taagactttttagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 78
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 77 tgtttagattcat 65
Score = 44.1 bits (22), Expect = 4e-04
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacat--ata 69
||||||||| |||||||| || || |||||||| | ||||||||||| ||||| |||
Sbjct: 26 taagactttctagcattgctcatatacatatagacgttaatgaatctaaacacatacata 85
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 86 tgtctagattcat 98
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| ||||||| |||||| |||||||||| |||||||||||
Sbjct: 117 tataagactttctagcattacccacatacatatagatgttaatgaatcta 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttat 106
|||||||||||||||||||||||
Sbjct: 94 tgggtaatgctagaaagtcttat 116
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 60.0 bits (30), Expect = 7e-09
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattca 81
|||||||| ||||||||||||| ||| |||||||||||| | |||||||| ||||||||
Sbjct: 89 tagcattgcccacattcatatatatgttaatgaatctag--atatatatgtctagattca 32
Query: 82 t 82
|
Sbjct: 31 t 31
Score = 54.0 bits (27), Expect = 4e-07
Identities = 51/58 (87%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 25 cattgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattcat 82
||||| ||||||||||||| ||| |||||||||||| |||||||| | |||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctag--acatatatatctagattcat 60
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 60.0 bits (30), Expect = 7e-09
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| ||||||| |||||| |||||||||| |||||||||||
Sbjct: 24 tataagactttctagcattacccacatacatatagatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttat 106
|||||||||||||||||||||||
Sbjct: 47 tgggtaatgctagaaagtcttat 25
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||||| |||||||| ||| |||||| |||||| |||||||||||| || || ||||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 72 --tttagattcat 82
|||||||||||
Sbjct: 86 tatttagattcat 98
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 13 aagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||| ||||||| |||||||||| |||||| ||||||||||| |||||||||
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatctaaacacatatat 84
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 7e-09
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcacata--ta 69
||||||||| |||||||| |||||| ||| |||||| |||| ||||||| || ||| ||
Sbjct: 137 taagactttctagcattgcccacatacatttagatgttaataaatctagacatatacata 78
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 77 tgtttagattcat 65
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaat 56
||||||||| |||||||| |||||||||||| ||| |||||||||
Sbjct: 105 taagactttctagcattgcccacattcatatggatactaatgaat 61
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| ||| |||| ||| ||||||||||||| ||||||||||||
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctag 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/73 (84%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggca--catata 69
||||||||| ||| | || ||| ||||||||||||| |||||||| ||| || ||||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 70 tgtttagattcat 82
||| |||||||||
Sbjct: 86 tgtctagattcat 98
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| ||||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 36 tagcattttccacattcatatcgatgccaatgaatctagacatatatat 84
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 26 attgtccacattcatatagatgctaatgaatctag 60
||||| ||||| ||||| |||||||||||||||||
Sbjct: 123 attgttcacatccatattgatgctaatgaatctag 89
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| || ||||| |||||| ||||||||| ||||||||||| ||||||||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatata 56
Query: 70 t 70
|
Sbjct: 55 t 55
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| ||||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 36 tagcattttccacattcatatcgatgccaatgaatctagacatatatat 84
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||||||||||| || ||||| ||||||||||||
Sbjct: 135 taagactttttagcattgtccacatttatttagatattaatgaatctag 87
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/49 (89%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| || |||||||||||| ||||||||| ||||||||||||
Sbjct: 26 taagactttctaccattgtccacat--atatagatgttaatgaatctag 72
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 58.0 bits (29), Expect = 3e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattca 81
||||||| |||||||||||| |||| |||||||||||| || |||||||| || |||||
Sbjct: 125 tagcatttcccacattcatattgatgttaatgaatctagacatatatatgtctacattca 66
Query: 82 t 82
|
Sbjct: 65 t 65
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 3e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacat 66
||||||||||| |||||||| |||| |||| ||||||| ||||||||||| |||||
Sbjct: 139 tataagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacat 83
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| ||||| ||| ||||||||||||||| ||||| |||||
Sbjct: 26 taagactttctagcactgtttacattcatatagatgttaatggatcta 73
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 56.0 bits (28), Expect = 1e-07
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacat--atatgtttagatt 79
||||||| |||||||||||| |||| ||||||||||| |||||| |||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatcta-gcacatacatatgtttagatt 94
Query: 80 cat 82
|||
Sbjct: 95 cat 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| |||||||||||| |||| |||||||||||
Sbjct: 126 tagcatttcccacattcatattgatgttaatgaatcta 89
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| |||||||| ||||| |||||||||| |||||||||||
Sbjct: 137 taagactttctagcattgctcacatacatatagatgttaatgaatcta 90
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||| ||||||| |||||||||| |||||| |||||||||||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatcta 73
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtctta 105
||||||||||||||||||||||
Sbjct: 47 tgggtaatgctagaaagtctta 26
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa
Japonica Group
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 53/61 (86%), Gaps = 4/61 (6%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatgtttagattca 81
||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct: 36 tagcatttcccacattcatattgatgctaatgaatctag----atatatgtctagattca 91
Query: 82 t 82
|
Sbjct: 92 t 92
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 33 acattcatatagatgctaatgaatctag 60
|||||||||| |||||||||||||||||
Sbjct: 110 acattcatattgatgctaatgaatctag 83
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||||||| ||||||||||||||||| || ||||||
Sbjct: 118 ccacattcatattgatgctaatgaatctagacatatatat 79
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa
Japonica Group
Length = 162
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 19 ttatagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||||| |||||||||||| |||| |||||||||||| || ||||||
Sbjct: 33 ttatagcattacccacattcatattgatgttaatgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| | ||||||||||| |||||||||||||||||
Sbjct: 36 tagcatttttcacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||||||||||||||||
Sbjct: 36 tagcattttccacattcatactgatgctaatgaatctag 74
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||||||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
|||||||| |||||| |||||||||| ||||||||||||
Sbjct: 101 tagcattgcccacatgcatatagatgttaatgaatctag 63
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||| |||| |||||||||||||||||
Sbjct: 121 tagcattttccacatttatattgatgctaatgaatctag 83
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||||||||| || ||||||||||||
Sbjct: 127 tagcattttccacattcatataggtgttaatgaatctag 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||||| || ||||||||||||
Sbjct: 45 ccacattcatataggtgttaatgaatctag 74
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||||||||||||||||
Sbjct: 112 tagcatttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||||||||| || ||||||||||||
Sbjct: 6 tagcattttccacattcatataggtgttaatgaatctag 44
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||||| || ||||||||||||
Sbjct: 88 ccacattcatataggtgttaatgaatctag 59
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 54.0 bits (27), Expect = 4e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| ||||||||||||| |||| |||||||||||
Sbjct: 109 tagcattttccacattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| ||||||||||||| |||| |||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctaggcacatatatgt 72
|||||||||||| ||||||||| ||||||| || ||||||||
Sbjct: 106 ccacattcatattgatgctaataaatctagacatatatatgt 65
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 31 ccacattcatatagatgctaatgaatctaggcacatatatg 71
|||||||||||| |||||||||||| |||| || |||||||
Sbjct: 11 ccacattcatattgatgctaatgaaactagacatatatatg 51
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| ||||||||||||| |||| |||||||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| ||||||||||||||||| |||||||||||
Sbjct: 36 tagcatttcccacattcatatagatgttaatgaatcta 73
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgct 49
||||||||| |||||||| ||| |||||||||||||||
Sbjct: 26 taagactttctagcattgcccatattcatatagatgct 63
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgct 49
||||| ||| |||||||| |||||||||||||||||||
Sbjct: 99 taagagtttctagcattgcccacattcatatagatgct 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatg 47
||||||||| |||| ||| |||||||||||||||||
Sbjct: 26 taagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||||||| ||||||| ||| ||||||||||||| ||| |||||||| ||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatctagacaca 79
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatata 43
||||||||||| |||||||||||| |||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatata 53
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/53 (88%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 32 cacattcatatagatgctaatgaatctaggca--catatatgtttagattcat 82
|||||||||||||||| |||||||||||| || |||||| |||||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcat 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| ||||||||||||||||| | |||||||||
Sbjct: 127 tagcatttcccacattcatatagatgttgatgaatcta 90
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatata 43
||||||||||| |||||||| |||||||||||||
Sbjct: 24 tataagactttctagcattgcccacattcatata 57
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 47 tgggcaatgctagaaagtcttataatatgaaa 16
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 62 tgggcaatgctagaaagtcttataatatgaaa 93
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 32 cacattcatatagatgctaatgaatctag 60
||||||||||| |||||||||||||||||
Sbjct: 84 cacattcatattgatgctaatgaatctag 56
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| || | |||||||| ||||||||||||||||| || ||||||
Sbjct: 127 tagcattttctatattcatattgatgctaatgaatctagacatatatat 79
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| |||||||||||| |||| |||||||||||| || ||||||
Sbjct: 127 tagcatttcccacattcatattgatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 33 acattcatatagatgctaatgaatctaggcaca 65
||||||||||||||| |||||||||||| ||||
Sbjct: 47 acattcatatagatgttaatgaatctagacaca 79
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 30 tccacattcatatagatgctaatgaatctaggcacatatat 70
||||||||||||| |||| |||||||||||| || ||||||
Sbjct: 118 tccacattcatattgatgttaatgaatctagacatatatat 78
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 50.1 bits (25), Expect = 6e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaat 56
||||||||| |||| ||| |||||||||||||||| ||||||||
Sbjct: 93 taagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| |||||||||||| |||| |||||||||||| || ||||||
Sbjct: 101 tagcatttcccacattcatattgatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctag 60
||||||||| |||||||| ||||||| ||| |||| ||||||||||||
Sbjct: 26 taagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatat 42
||||||||| |||||||| ||||||||||||
Sbjct: 109 taagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| ||||||||||||| ||| |||||||||||| || ||||||
Sbjct: 127 tagcattctccacattcatattaatgttaatgaatctagacatatatat 79
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatat 70
||||||| |||||||||||| |||| |||||||||||| || ||||||
Sbjct: 10 tagcatttcccacattcatattgatgttaatgaatctagacatatatat 58
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| |||||||||||| |||| |||||||||||
Sbjct: 101 tagcatttcccacattcatattgatgttaatgaatcta 64
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcaca 65
||||||| ||| ||||||||||||| |||||||||||| ||||
Sbjct: 127 tagcattacccatattcatatagatgttaatgaatctagacaca 84
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatc 57
||||||| |||||||||||| ||||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgctaatgaatc 71
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatc 57
||||||| |||||||||||| ||||||||||||||
Sbjct: 107 tagcatttcccacattcatattgatgctaatgaatc 72
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctaggcacatatat 70
|||||||||||| |||| |||||||||||| || ||||||
Sbjct: 118 ccacattcatattgatggtaatgaatctagacatatatat 79
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 13 aagactttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||||| ||||||| ||||||||| ||||| | ||||||||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctag 94
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 23 agcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||| ||||| | ||||||||||||
Sbjct: 11 agcattgcccacattcacatagaagttaatgaatctag 48
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 25 cattgtccacattcatatagatgctaatgaatctag 60
|||| ||||||||||||| |||| ||||||||||||
Sbjct: 96 cattttccacattcatattgatgttaatgaatctag 61
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 48.1 bits (24), Expect = 3e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||| |||||||||||| |||| |||||||||||| || |||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatctagacatatata 83
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 14 agactttatagcattgtccacattcatatagatgctaatg 53
||||||| ||||||| ||| |||||||||||||||||||
Sbjct: 57 agactttcaagcattgcccatattcatatagatgctaatg 96
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatc 57
||||||| |||||||||||| ||||||||||||||
Sbjct: 10 tagcatttcccacattcatattgatgctaatgaatc 45
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatc 57
||||||| |||||||||||| ||||||||||||||
Sbjct: 81 tagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatgaaa 115
|||| |||||||||||||||||| ||||||||
Sbjct: 45 tgggcaatgctagaaagtcttataatatgaaa 76
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 25 cattgtccacattcatatagatgctaatgaatctag 60
|||| ||||||||||||| |||| ||||||||||||
Sbjct: 105 cattttccacattcatattgatgttaatgaatctag 70
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||| |||||||| |||| ||||||||||||
Sbjct: 114 tagcattttccatattcatattgatgttaatgaatctag 76
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 32 cacattcatatagatgctaatgaatct 58
||||||||||| |||||||||||||||
Sbjct: 94 cacattcatattgatgctaatgaatct 68
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| ||||||||||||||||
Sbjct: 101 tagcatttcccacattcatattaatgctaatgaatctag 63
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 32 cacattcatatagatgctaatgaatctaggcacatatat 70
||||| ||||| ||||||||||||||||| || ||||||
Sbjct: 117 cacatccatattgatgctaatgaatctagacatatatat 79
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatct 58
|||| |||| ||| |||||||||||| || |||||| ||||||||||
Sbjct: 97 taaggctttctagtattgtccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||||||| |||| ||||| ||||||
Sbjct: 36 tagcattttccacattcatattgatgttaatgtatctag 74
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 118 tagcatttcccacattcatattgatgttaatgaatctag 80
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
|||||||| | | ||||||||||||| ||||||||||||
Sbjct: 127 tagcattgcctatattcatatagatgttaatgaatctag 89
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| ||||||||||||||||
Sbjct: 36 tagcatttcccacattcatattaatgctaatgaatctag 74
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaat 56
||||||| || |||||||||| |||||||||||||
Sbjct: 115 tagcattttctacattcatattgatgctaatgaat 81
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 127 tagcatttcccacattcatattgatgttaatgaatctag 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| |||| |||||||| |||| |||||||||||
Sbjct: 36 tagcattttccatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaat 52
|||||| | |||||||||| ||||||||||||| |||| ||||
Sbjct: 20 tataagtcattatagcattttccacattcatattgatgttaat 62
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| |||||||||||| |||| |||||||||||
Sbjct: 99 tagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaat 56
||||||| |||||||||||| |||||||||||||
Sbjct: 83 tagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||||||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
|||||||| | | ||||||||||||| ||||||||||||
Sbjct: 36 tagcattgcctatattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||| ||||| |||| ||||||||||||
Sbjct: 36 tagcattttccacatccatattgatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| |||| ||||||||||||
Sbjct: 46 ccacattcatattgatgttaatgaatctag 75
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| |||| ||||||||||||
Sbjct: 45 ccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 35 attcatatagatgctaatgaatctag 60
|||||||| |||||||||||||||||
Sbjct: 92 attcatattgatgctaatgaatctag 67
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctaggcacatatatg 71
||||||| ||| |||||||| |||| |||||||||||| || |||||||
Sbjct: 101 tagcattttccgtattcatattgatgataatgaatctagacatatatatg 52
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| |||| ||||||||||||
Sbjct: 106 ccacattcatattgatgttaatgaatctag 77
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| ||| |||||||||||||
Sbjct: 45 ccacattcatattgatactaatgaatctag 74
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 23 agcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||| ||||| | ||||||||||||
Sbjct: 9 agcattgcccacattcacatagaagttaatgaatctag 46
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 23 agcattgtccacattcatatagatgctaatgaatctag 60
||||||| ||||||||| ||||| | ||||||||||||
Sbjct: 129 agcattgcccacattcacatagaagttaatgaatctag 92
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| |||| ||||||||||||
Sbjct: 95 ccacattcatattgatgttaatgaatctag 66
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 19 ttatagcattgtccacattcatatagatgctaatgaatctag 60
|||||||||| ||| ||| |||| |||||||||||||||||
Sbjct: 33 ttatagcatttcccatatttatattgatgctaatgaatctag 74
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa
Indica Group
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 30 tccacattcatatagatgctaatgaatcta 59
||||||||||||| |||| |||||||||||
Sbjct: 91 tccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 44.1 bits (22), Expect = 4e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 tagcattgtccacattcatatagatgctaatgaatcta 59
||||||| |||||||||||| |||| |||||||||||
Sbjct: 109 tagcatttcccacattcatattgatgttaatgaatcta 72
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatctag 60
|||||||||||| |||| ||||||||||||
Sbjct: 96 ccacattcatattgatgttaatgaatctag 67
